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1 parent 60fd9f2 commit a528a83Copy full SHA for a528a83
1 file changed
dokdo/api/alpha_diversity_plot.py
@@ -56,11 +56,9 @@ def alpha_diversity_plot(
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%matplotlib inline
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import seaborn as sns
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sns.set()
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- qzv_file = '/Users/sbslee/Desktop/dokdo/data/moving-pictures-tutorial/faith_pd_vector.qza'
+ qza_file = '/Users/sbslee/Desktop/dokdo/data/moving-pictures-tutorial/faith_pd_vector.qza'
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metadata_file = '/Users/sbslee/Desktop/dokdo/data/moving-pictures-tutorial/sample-metadata.tsv'
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- dokdo.alpha_diversity_plot(qzv_file,
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- metadata_file,
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- 'body-site')
+ dokdo.alpha_diversity_plot(qza_file, metadata_file, 'body-site')
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plt.tight_layout()
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.. image:: images/alpha_diversity_plot.png
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