made changes

Author: tpoorten

vcf_to_genotypeTab.R

@@ -11,6 +11,7 @@
 #         0 represents homozygous reference allele
 #         1 represents heterozygous
 #         2 represents homozygous alternative allele
+#  	      NA represents missing data
 
 ## set working directory to the path where vcf file is located
 setwd("~/Dropbox/bioinfo/snps/")

vcf_to_genotypeTab.Rscript

@@ -11,6 +11,7 @@
 #         0 represents homozygous reference allele
 #         1 represents heterozygous
 #         2 represents homozygous alternative allele
+#		  NA represents missing data
 
 ## set working directory to the path where vcf file is located
 # setwd("~/Dropbox/bioinfo/snps/")

vcf_to_genotypeTab_meta.R

@@ -11,6 +11,7 @@
 #         0 represents homozygous reference allele
 #         1 represents heterozygous
 #         2 represents homozygous alternative allele
+#  	      NA represents missing data
 
 ## set working directory to the path where vcf file is located
 setwd("~/Dropbox/bioinfo/snps/SNP_data_analysis/")

vcf_to_genotypeTab_meta.Rscript

@@ -15,6 +15,7 @@
 #         0 represents homozygous reference allele
 #         1 represents heterozygous
 #         2 represents homozygous alternative allele
+#		  NA represents missing data
 
 ## set working directory to the path where vcf file is located
 #setwd("~/Dropbox/bioinfo/snps/SNP_data_analysis/")