TrackMate StarDist custom model path error when using batcher

[jpylvanainen]

Hi,

I have been trying to use a custom made StarDist model to process multiple files through the batcher. I get an error "Model file path is not set." in the batcher log window.

When using the custom StarDist model in TrackMate directly, the detection works well. I created a xml file with the and used it in the batcher, as instructed.

Thanks,
Joanna

[jpylvanainen]

Hey @tinevez, have you had a chance to take a look at this issue? :)

[tinevez]

Not yet sorry.