CHANGELOG.md

Changelog

All notable changes to tool-NFTest.

The format is based on Keep a Changelog.

This project adheres to Semantic Versioning.

1.3.1 - 2025-07-01

Fixed

• Resolve global config relative to NFT_TESTDIR

1.3.0 - 2025-06-26

Added

• Allow support for separation of NFTest YAML and test files from pipeline code

1.2.1 - 2025-03-06

Fixed

• Prevent hatch-vcs from picking up major version alias tags

1.2.0 - 2024-11-19

Added

• Add --report flag to write out a summary JSON file

Changed

• Migrate package definition to pyproject.toml

Fixed

• Properly catch failing test cases

1.1.0 - 2024-07-08

Added

• Validation of reference files

Changed

• Make nftest run exit with the number of failed tests
• Use shell=False for subprocess
• Capture Nextflow logs via syslog rather than console
• Format all code with ruff
• Encapsulate NFTestAssert interface, rewrite tests

Fixed

• Make nftest with no arguments print usage and exit
• Resolve non-determinism in NFTestENV unit tests

1.0.1 - 2024-01-05

Fixed

• Path type passed to glob to identify files

1.0.0 - 2023-10-23

Added

• Support for patterns in expected and actual file paths

1.0.0-rc.4 - 2023-10-04

Changed

• Wrap all NextFlow output with real-time line-by-line log statements
• Wrap custom comparison to log through NFTest logger
• Add DEBUG lines about specific asserts
• Assert that actual files are modified by pipelines

Fixed

• Tests after real-time logging

1.0.0-rc.3 - 2023-05-25

Fixed

• Properly set default value of clean_logs according to case and global settings

1.0.0-rc.2 - 2023-03-09

Added

• Case name to output directory path to avoid over-writing
• Support for Nextflow profiles

Changed

• Override skip from configuration YAML for command line test cases

1.0.0-rc.1 - 2022-12-01

Added

• .env loading
• Custom directory options
• Logging
• Tests

Changed

• Document detailed options in README