README.md

Use case evaluation

1. Galaxy histories for each use case are provided in the corresponding README files (e.g., bee/README.md).

2. Run the summary notebook

   • Notebook: plot_and_filter.ipynb

3. Use case specific plots

   • Plots for each use case are generated using the scripts available at: https://github.com/usegalaxy-eu/MAGs-visualization/tree/main/use-cases