I have a more recent version of miniconda and have not been able to run the pipeline due to this error:
Error in checkForExperimentalReplicates(object, modelMatrix) :
The design matrix has the same number of samples and coefficients to fit,
so estimation of dispersion is not possible. Treating samples
as replicates was deprecated in v1.20 and no longer supported since v1.22.
could it be related to miniconda version? Because I saw in your multiome data test the inputs to the code are the same as mine and I don't replicates per cluster.
Thank you for your attention,
Best
Paulo
I have a more recent version of miniconda and have not been able to run the pipeline due to this error:
Error in checkForExperimentalReplicates(object, modelMatrix) :
The design matrix has the same number of samples and coefficients to fit,
so estimation of dispersion is not possible. Treating samples
as replicates was deprecated in v1.20 and no longer supported since v1.22.
could it be related to miniconda version? Because I saw in your multiome data test the inputs to the code are the same as mine and I don't replicates per cluster.
Thank you for your attention,
Best
Paulo