v0.0.2

Author: Maarten-vd-Sande

CHANGELOG.md

@@ -6,12 +6,15 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
 All changed fall under either one of these types: `added`, `changed`, `deprecated`, `removed`, `fixed`, `security`.
 
 ## [Unreleased]
+
+## v0.0.2 - 2020-06-29
 ### Fixed
 - samtools using the correct nr of threads after update to v1.10
 
 ### Changed
 
 - The count table for ATAC/ChIP-seq peaks is now made from finding all peaks within a range of 200 bp, and taking the most significant one (gimmemotifs' combine_peaks) and extending the remaining peaks 200 bp. On this count table quantile normalisation, TMM, RLE and upperquartile normalisation with CPM is done. Downstream steps log transform these and mean center them. This however means that for broadpeaks no count_table is generated.
+- Snakefmt -l 121 applied
 
 ## v0.0.1 - 2020-06-17
 Many minor bug- and quality of life fixes.

bin/seq2science

@@ -27,7 +27,7 @@ except ImportError:
     conda_frontend = "conda"
 
 
-__version__ = "0.0.1"
+__version__ = "0.0.2"
 
 
 def main():

pyproject.toml

@@ -3,7 +3,7 @@ name = "seq2science"
 packages = ["seq2science"]
 package_data = "{'seq2science':['envs/*', 'rules/*', 'schemas/*', 'schemas/*/*', 'scripts/*', 'workflows/*/*']}"
 include_package_data = true
-version = "0.0.1"
+version = "0.0.2"
 description = "seq2science: easy pre-processing of ngs data."
 author = [
     "Maarten van der Sande <M.vanderSande@science.ru.nl>"]