Merge pull request #24 from zhangtaolab/dev

Fix ChorusPBGUI bug due to matplotlib version change

Author: ljq12697

ChorusGUI/run_probMW.py

@@ -431,6 +431,6 @@ def saveProbe(self):
     tb.show()
 
     span = SpanSelector(tb.widget.canvas.ax1, tb.oneselect, 'horizontal', useblit=True,
-                                 rectprops=dict(alpha=0.3, facecolor='grey'))
+                        props=dict(alpha=0.3, facecolor='grey'))
 
-    sys.exit(app.exec_())
+    sys.exit(app.exec_())

ChorusPBGUI.py

@@ -603,7 +603,7 @@ def main():
     tb.show()
 
     span = SpanSelector(tb.widget.canvas.ax1, tb.oneselect, 'horizontal', useblit=True,
-                                 rectprops=dict(alpha=0.3, facecolor='grey'))
+                        props=dict(alpha=0.3, facecolor='grey'))
 
     sys.exit(app.exec_())
 

requirements.txt

@@ -1,7 +1,7 @@
 Cython
 numpy
 pyfasta
-primer3-py
+primer3-py>=1.0.0
 pandas<2
 pyBigWig
 pybedtools

requirements_GUI.txt

@@ -1,9 +1,9 @@
 Cython
 numpy
 pyfasta
-primer3-py
+primer3-py>=1.0.0
 pandas<2
 pyBigWig
-matplotlib
+matplotlib>=3.5.0
 PyQt5<5.11
 SIP>=4