Data release 2026#478
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…r version. I wasnt careful and didnt check vscodes changes when saving
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:13Z I am not sure about adding all of those links at the top. Are those permanent records? |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:14Z you have nan in the amplitude range |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:15Z Where are these threshold coming from? Explain.
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:16Z Non running mice, correct? Add interpretation. |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:16Z What are the numbers 0, 1, 2... referring to? |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:17Z Are the colors the same as in the mesoscope notebook ? |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:18Z I think running speed is not recorded during the opto-tagging part. This is because Bonsai turns off. You should mention it. |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:19Z What do the colors means? |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:19Z Is the brain starting at around 5? Can you check? |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:20Z Is this code the same one we used before? Or is this entirely new? |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:21Z It might be worth adding vertical bars to all of the sub-gratings of the sequence. There is imposed structure from that.
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:21Z You need to explain what are those 3 plots more. Also are the units order by depth? |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:22Z You need to mention that this is an average across units? Currently it is only stated in the code.
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:23Z remove next steps. This will go in the manuscript. |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:24Z We need to mention more details about labelling here. This is a pan-neuronal line. Perhaps add references in the literature to support the reporter and cre line. |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:25Z Massive change in network state here. I have rarely seen such a strong change. |
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View / edit / reply to this conversation on ReviewNB jeromelecoq commented on 2026-05-18T18:32:26Z Maybe "next steps" do not belong in this notebook. This is an introduction to data. The next steps should be in the data release manuscript |
…paper. adjust z score ephys plots
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