Issues · AllenNeuralDynamics/aind-fiber-photometry-pipeline · GitHub

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update workflow issue

#39

· arielleleon opened

on Jul 10, 2026

stale "(work in progress) Dynamic Foraging task pipeline" link

#37

· dougollerenshaw opened

on Jun 30, 2026

Python `run_pipeline` example in the README is broken

#36

· dougollerenshaw opened

on Jun 30, 2026

Output `results` tree is inconsistent with the prose (missing `qc-raw`, wrong caption on `dynamic-foraging-qc`)

#35

· dougollerenshaw opened

on Jun 30, 2026

Output section contains copy-pasted planar-ophys/imaging boilerplate

#34

· dougollerenshaw opened

on Jun 30, 2026

README lists `nwb-subject-capsule` as a pipeline step, but it was removed

#33

· dougollerenshaw opened

on Jun 30, 2026

Inconsistent Code Ocean pipeline links on `master` (headline vs Run section)

#32

· dougollerenshaw opened

on Jun 30, 2026

Automated github releases not working as expected

#31

· dougollerenshaw opened

on Jun 30, 2026

Integrate parameters for fip qc raw

#30

· dougollerenshaw opened

on Jun 26, 2026

Update readme to make it clear that this is the Dynamic Foraging + Fiber pipeline

#23

· dougollerenshaw opened

on May 29, 2026

add qc changes

#11

· arielleleon opened

on Mar 5, 2026

Remove nwb subject capsule from the fiber pipeline

#7

· arielleleon opened

on Jul 14, 2025