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Merged
zoeread merged 3 commits into from
Apr 23, 2026
Merged

Checks edits 20260423 #58

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60a6181
Edited code to show AQ600 data
zoeread Apr 23, 2026
3cd54b1
Create .RDataTmp3
zoeread Apr 23, 2026
a5f8fe6
Edited code
zoeread Apr 23, 2026
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5 changes: 3 additions & 2 deletions current-data-zr.qmd
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Original file line number Diff line number Diff line change
Expand Up @@ -29,6 +29,7 @@ library(gt)
library(lubridate)
library(cowplot)
library(forcats)
library(stringr)

SITES <- params$SITES
PATH <- params$DROPBOX
Expand Down Expand Up @@ -290,7 +291,7 @@ if(nrow(sf) > 0) {

for(site in unique(sf_long_current$Site)) {
p <- ggplot(filter(sf_long_current, Site == site),
aes(TIMESTAMP, value, color = interaction(Tree))) +
aes(TIMESTAMP, value, color = Tree)) +
facet_grid(. ~ Plot) +
ylab("Raw sapflow") +
geom_point(na.rm = TRUE) +
Expand Down Expand Up @@ -526,7 +527,7 @@ max_counts <- site_locations %>%
# mutate(Plot = fct_relevel(Plot, c("UP", "TR", "WTE", "W", "WC")))

prop_plot_600 <- troll_long_current %>%
filter(name == "Pressure" & !is.na(value) & Table == "WaterLevel600") %>% ##Why are there 3 replicates for each timestamp and only one has a value?
filter(name == "Pressure" & !is.na(value) & str_detect(Table, "WaterLevel600")) %>% ##Why are there 3 replicates for each timestamp and only one has a value?
group_by(Site, Plot) %>%
count() %>%
bind_rows(anti_join(max_counts, .)) %>%
Expand Down
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