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390 changes: 390 additions & 0 deletions notebooks/workflow/Flowchart.ipynb

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6 changes: 6 additions & 0 deletions notebooks/workflow/environment.yml
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name: workflow
channels:
- bioconda
- r
- defaults
prefix: /Users/lsantuari/Applications/Programming/miniconda3/envs/workflow

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please delete and add dependencies e.g., networkx etc.

2 changes: 2 additions & 0 deletions notebooks/workflow/readme.md
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https://mybinder.org/v2/gh/GooglingTheCancerGenome/sv-channels/workflow?filepath=%2Fblob%2Fdev%2Fnotebooks%2FFlowchart.ipynb

@arnikz arnikz Jan 22, 2021

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  • rename file to README.md
  • fix URL

related to #41


10 changes: 0 additions & 10 deletions scripts/utils/collate_calls_cv.sh

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5 changes: 0 additions & 5 deletions scripts/utils/copy_svcallsets.sh

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