Bump pyrefly from 0.54.0 to 0.59.0

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test (3.9, macos-latest)

test (3.9, ubuntu-latest)

test (3.9, windows-latest)

test (3.10, macos-latest)

test (3.10, ubuntu-latest)

test (3.10, windows-latest)

test (3.11, macos-latest)

test (3.11, ubuntu-latest)

test (3.11, windows-latest)

test (3.12, macos-latest)

test (3.12, ubuntu-latest)

test (3.12, windows-latest)

test (3.13, macos-latest)

test (3.13, ubuntu-latest)

test (3.13, windows-latest)

test (3.13t, macos-latest)

test (3.13t, ubuntu-latest)

test (3.13t, windows-latest)

test (3.14, macos-latest)

test (3.14, ubuntu-latest)

test (3.14, windows-latest)

test (3.14t, macos-latest)

test (3.14t, ubuntu-latest)

test (3.14t, windows-latest)

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