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Main to Stable 2026.07.1 - #427

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Sam Clarke-Green (t00sa) merged 60 commits into
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Jul 13, 2026
Merged

Main to Stable 2026.07.1#427
Sam Clarke-Green (t00sa) merged 60 commits into
stablefrom
main

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@james-bruten-mo

@james-bruten-mo James Bruten (james-bruten-mo) commented Jul 13, 2026

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PR Summary

Sci/Tech Reviewer:
Code Reviewer: Sam Clarke-Green (@t00sa)

Code Quality Checklist

  • I have performed a self-review of my own code
  • My code follows the project's style guidelines
  • Comments have been included that aid understanding and enhance the readability of the code
  • My changes generate no new warnings
  • All automated checks in the CI pipeline have completed successfully

Testing

  • I have tested this change locally, using the LFRic Core rose-stem suite
  • If required (e.g. API changes) I have also run the LFRic Apps test suite using this branch
  • If any tests fail (rose-stem or CI) the reason is understood and acceptable (e.g. kgo changes)
  • I have added tests to cover new functionality as appropriate (e.g. system tests, unit tests, etc.)
  • Any new tests have been assigned an appropriate amount of compute resource and have been allocated to an appropriate testing group (i.e. the developer tests are for jobs which use a small amount of compute resource and complete in a matter of minutes)

trac.log

Security Considerations

  • I have reviewed my changes for potential security issues
  • Sensitive data is properly handled (if applicable)
  • Authentication and authorisation are properly implemented (if applicable)

Performance Impact

  • Performance of the code has been considered and, if applicable, suitable performance measurements have been conducted

AI Assistance and Attribution

  • Some of the content of this change has been produced with the assistance of Generative AI tool name (e.g., Met Office Github Copilot Enterprise, Github Copilot Personal, ChatGPT GPT-4, etc) and I have followed the Simulation Systems AI policy (including attribution labels)

Documentation

  • Where appropriate I have updated documentation related to this change and confirmed that it builds correctly

PSyclone Approval

  • If you have edited any PSyclone-related code (e.g. PSyKAl-lite, Kernel interface, optimisation scripts, LFRic data structure code) then please contact the TCD Team

Sci/Tech Review

  • I understand this area of code and the changes being added
  • The proposed changes correspond to the pull request description
  • Documentation is sufficient (do documentation papers need updating)
  • Sufficient testing has been completed

(Please alert the code reviewer via a tag when you have approved the SR)

Code Review

  • All dependencies have been resolved
  • Related Issues have been properly linked and addressed
  • CLA compliance has been confirmed
  • Code quality standards have been met
  • Tests are adequate and have passed
  • Documentation is complete and accurate
  • Security considerations have been addressed
  • Performance impact is acceptable

@james-bruten-mo
Stable to Main 2026.03.1 (#298)
a1faf6b
@EdHone @mo-rickywong
IO_Demo benchmarking configuration (#232)
c640308 
Co-authored-by: Ricky Wong <141156427+mo-rickywong@users.noreply.github.com>
@james-bruten-mo
add validate symlinks calling workflow (#300)
d93d272
@mo-rickywong @MatthewHambley
Purge Intermediate Api access to configuration object from in favor o…
6c47d43 
…f new config_type object (#262)

Co-authored-by: Matthew Hambley <MatthewHambley@users.noreply.github.com>
@EdHone @mo-lucy-gordon
Enable reading for cyclic data files using temporal controller (#231)
9a9717f 
Co-authored-by: mo-lucy-gordon <120176477+mo-lucy-gordon@users.noreply.github.com>
@mike-hobson @cameronbateman-mo
Correct bug in global mesh (#309)
681ea91 
Co-authored-by: Cameron Bateman <cameron.bateman@metoffice.gov.uk>
@tommbendall @allynt
Safely compute height fields for continuous function spaces (#284)
018e40c 
Co-authored-by: allynt <allyn.treshansky@gmail.com>
@mo-lucy-gordon @Pierre-siddall
Adding fortitude (#217)
b7543b9 
Co-authored-by: Pierre Siddall <43399998+Pierre-siddall@users.noreply.github.com>
@andrewcoughtrie
Fix name of kernel stub generator (#315)
c6ebe4e
@shreybh1 @EdHone
@mo-alistairp @MetBenjaminWent @harry-shepherd @mike-hobson @tommbendall @james-bruten-mo @MatthewHambley @andrewcoughtrie @mo-rickywong @mo-lucy-gordon @ericaneininger @cameronbateman-mo @allynt @Pierre-siddall
removed creation of xmap in generate_redistribution_map (#276)
6dfdb87 
Co-authored-by: Ed Hone <68642690+EdHone@users.noreply.github.com>
Co-authored-by: Alistair Pirrie <187289694+mo-alistairp@users.noreply.github.com>
Co-authored-by: Benjamin Went <136574563+MetBenjaminWent@users.noreply.github.com>
Co-authored-by: Harry Shepherd <17930806+harry-shepherd@users.noreply.github.com>
Co-authored-by: Mike Hobson <26921912+mike-hobson@users.noreply.github.com>
Co-authored-by: Thomas Bendall <14180399+tommbendall@users.noreply.github.com>
Co-authored-by: James Bruten <109733895+james-bruten-mo@users.noreply.github.com>
Co-authored-by: Matthew Hambley <MatthewHambley@users.noreply.github.com>
Co-authored-by: Andrew Coughtrie <24609575+andrewcoughtrie@users.noreply.github.com>
Co-authored-by: Ricky Wong <141156427+mo-rickywong@users.noreply.github.com>
Co-authored-by: mo-lucy-gordon <120176477+mo-lucy-gordon@users.noreply.github.com>
Co-authored-by: Erica Neininger <107684099+ericaneininger@users.noreply.github.com>
Co-authored-by: Cameron Bateman <cameron.bateman@metoffice.gov.uk>
Co-authored-by: allynt <allyn.treshansky@gmail.com>
Co-authored-by: Pierre Siddall <43399998+Pierre-siddall@users.noreply.github.com>
@stevemullerworth
Null island left as uninitialised value for planar non-spherical mesh…
4637bb3 
…es (#318)
@EdHone
Replace sleep intrinsic with C bindings (#320)
3ef2ace
@EdHone
Reformat stop calls to avoid model stopping without error code (#331)
3a1cf78 
Testing was successful on both the Core and Apps repos, so I think the change is good to go.
@Pierre-siddall @mo-lucy-gordon
Add fortitude to CI/CD pipeline (#258)
1fe91a5 
Co-authored-by: mo-lucy-gordon <120176477+mo-lucy-gordon@users.noreply.github.com>
@mo-lucy-gordon
Removed rules that were causing errors (#335)
7ed072b
@iboutle
Infrastructure for PMSL calculation (#303)
03753d8
@mo-rickywong @mike-hobson
Allow applications partitioning meshes to specify partition constrain…
a963e38 
…ts (imposed by multigrid) (#290)

Co-authored-by: Mike Hobson <26921912+mike-hobson@users.noreply.github.com>
@james-bruten-mo
bump revision (#343)
2073832
@james-bruten-mo
remove source directory from housekeeping (#346)
f9ae4ed
@james-bruten-mo
Add external rose metadata to configurator (#285)
3c8ccc6
@mike-hobson @MatthewHambley @EdHone
Clean halo depth (#333)
401e98f 
Co-authored-by: Matthew Hambley <MatthewHambley@users.noreply.github.com>
Co-authored-by: Ed Hone <68642690+EdHone@users.noreply.github.com>
@mo-alistairp @andrewcoughtrie
Replace copy_field_alg_mod with real_to_real_x (#317)
74edca9 
Co-authored-by: Andrew Coughtrie <24609575+andrewcoughtrie@users.noreply.github.com>
@EdHone @mo-lucy-gordon
Enable interpolation of time-varying input data with temporal control…
70e51d5 
…ler (#311)

Co-authored-by: mo-lucy-gordon <120176477+mo-lucy-gordon@users.noreply.github.com>
@EdHone @allynt
Temporal reading configuration for io_demo (#330)
3df4c5c 
Co-authored-by: allynt <1542786+allynt@users.noreply.github.com>
@tommbendall @EdHone
New function space options for coordinate fields (#238)
f865507 
Co-authored-by: EdHone <edward.hone@metoffice.gov.uk>
@hiker
Add skeleton fab script (#246)
18ccb42
@mo-marqh @james-bruten-mo
Release management: version string and components (#340)
ee17961 
Co-authored-by: James Bruten <109733895+james-bruten-mo@users.noreply.github.com>
@james-bruten-mo @tommbendall
Fix core macros (#360)
70405b5 
Co-authored-by: Thomas Bendall <14180399+tommbendall@users.noreply.github.com>
@stevemullerworth @mike-hobson
Extend values doc in modeldb section (#362)
3c9620f 
Co-authored-by: Mike Hobson <26921912+mike-hobson@users.noreply.github.com>
@mike-hobson @EdHone
Fix log field (#347)
ae610b1 
Co-authored-by: EdHone <edward.hone@metoffice.gov.uk>
@andrewcoughtrie @mike-hobson @allynt
Hello World (Skeleton) Tutorial (#385)
5306f5b 
Co-authored-by: Mike Hobson <26921912+mike-hobson@users.noreply.github.com>
Co-authored-by: allynt <1542786+allynt@users.noreply.github.com>
@andrewcoughtrie @mike-hobson
Simple diffusion tutorial (#387)
29c0982 
Co-authored-by: mike-hobson <26921912+mike-hobson@users.noreply.github.com>
@EdHone @andrewcoughtrie
IO_demo checkpointing (#304)
1565aa4 
Co-authored-by: Andrew Coughtrie <24609575+andrewcoughtrie@users.noreply.github.com>
@tommbendall @james-bruten-mo
Address Issues with Face Selectors (#349)
4eab65b 
Co-authored-by: James Bruten <109733895+james-bruten-mo@users.noreply.github.com>
@mo-marqh
_field_group naming convention for lfric_apps use (#388)
bb10f89
@mo-marqh @james-bruten-mo
Remove post processing core (#372)
0426836 
Co-authored-by: James Bruten <109733895+james-bruten-mo@users.noreply.github.com>
@stevemullerworth
Lessimplicit (#407)
4c8b0a8
@EdHone @andrewcoughtrie
De-couple XIOS context definition from object initialisation (#382)
fa820c1 
Co-authored-by: Andrew Coughtrie <24609575+andrewcoughtrie@users.noreply.github.com>
@EdHone @svadams
Remove buffer_factor_size setting from canned iodef.xml files (#408)
ce5d8d6 
Co-authored-by: svadams <svadams@users.noreply.github.com>
@ukmo-juan-castillo @mo-lottieturner
Remove base mesh dependency in compute sample kernel (#313)
a53c2ac 
Co-authored-by: Lottie Turner <120099755+mo-lottieturner@users.noreply.github.com>
@mcdalvi
Allow coarse-grid fields with ndata levels: vn3.1 read coarse 2d (#369)
b2374d3
@EdHone
Fix parallel implementation of temporal reading (#414)
23f4ee4
@cjohnson-pi @mo-rickywong @james-bruten-mo
Add new stretching transformation to mesh tools (#270)
b85ebad 
Co-authored-by: Ricky Wong <141156427+mo-rickywong@users.noreply.github.com>
Co-authored-by: James Bruten <109733895+james-bruten-mo@users.noreply.github.com>
@mo-rickywong @tommbendall
@stevemullerworth @andrewcoughtrie @MatthewHambley @james-bruten-mo
Remove module scope access from LFRic Core driver/applications (#324)
5d6b2db 
Co-authored-by: Thomas Bendall <14180399+tommbendall@users.noreply.github.com>
Co-authored-by: Steve Mullerworth <26165365+stevemullerworth@users.noreply.github.com>
Co-authored-by: Andrew Coughtrie <24609575+andrewcoughtrie@users.noreply.github.com>
Co-authored-by: Matthew Hambley <MatthewHambley@users.noreply.github.com>
Co-authored-by: James Bruten <109733895+james-bruten-mo@users.noreply.github.com>
@sergisiso @james-bruten-mo
Add support for psyclone 3.3, nvfortran and amdflang (#338)
99d8d2b 
Co-authored-by: James Bruten <109733895+james-bruten-mo@users.noreply.github.com>
@james-bruten-mo
Core vn3.2 release (#425)
5ab4814
@github-actions github-actions Bot added the cla-modified The CLA has been modified as part of this PR - added by GA label Jul 13, 2026
@github-actions

github-actions Bot commented Jul 13, 2026

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⚠️ Hello James Bruten (@james-bruten-mo)!

Your CLA signature was found on the base branch, but you appear to have modified the CONTRIBUTORS.md file in this PR.

Please do not edit the CONTRIBUTORS.md file. If you have already signed the CLA, revert changes to the file and your signature will be picked up.

@t00sa
Sam Clarke-Green (t00sa) merged commit 5d2a8b1 into stable Jul 13, 2026
25 of 26 checks passed
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Reviewers

@t00sa Sam Clarke-Green (t00sa) t00sa approved these changes
@andrewcoughtrie Andrew Coughtrie (andrewcoughtrie) Awaiting requested review from andrewcoughtrie andrewcoughtrie is a code owner
@MatthewHambley Matthew Hambley (MatthewHambley) Awaiting requested review from MatthewHambley MatthewHambley is a code owner
@mo-rickywong Ricky Wong (mo-rickywong) Awaiting requested review from mo-rickywong mo-rickywong is a code owner
@TeranIvy Iva Kavcic (TeranIvy) Awaiting requested review from TeranIvy TeranIvy is a code owner
@mike-hobson Mike Hobson (mike-hobson) Awaiting requested review from mike-hobson mike-hobson is a code owner
@tommbendall Thomas Bendall (tommbendall) Awaiting requested review from tommbendall tommbendall is a code owner

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@james-bruten-mo James Bruten (james-bruten-mo)

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cla-modified The CLA has been modified as part of this PR - added by GA

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