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python problems with gff3_fix

Status: Open.

#142 In NAL-i5K/GFF3toolkit;

· jd3234 opened on Jan 29, 2026

ValueError: max() arg is an empty sequence

Status: Open.

#141 In NAL-i5K/GFF3toolkit;

· sc-wenxinqiang opened on Nov 19, 2024

FileNotFoundError: No such file or directory: 'makeblastdb' while running gff3_QC

Status: Open.

#139 In NAL-i5K/GFF3toolkit;

· hj-99 opened on Nov 6, 2024

gff3_QC error

Status: Open.

#137 In NAL-i5K/GFF3toolkit;

· Ziwei-Liu opened on May 17, 2024

Question about gff_merge

Status: Open.

#136 In NAL-i5K/GFF3toolkit;

· sjtugrc opened on Apr 27, 2024

gff3_fix error

Status: Open.

#135 In NAL-i5K/GFF3toolkit;

· Rhinogradentia opened on Apr 17, 2024

Program gff3_sort encountered an error.

Status: Open.

#130 In NAL-i5K/GFF3toolkit;

· wjx121 opened on Aug 21, 2023

Problem with "gff3_ID_generator.py"

Status: Open.

#129 In NAL-i5K/GFF3toolkit;

· MesYosra opened on Mar 6, 2023

Error in gff3_fix

Status: Open.

#128 In NAL-i5K/GFF3toolkit;

· DiegoSafian opened on Dec 27, 2022

KeyError: 'replace'

bug

Status: Open.

#127 In NAL-i5K/GFF3toolkit;

· meiyang12 opened on Nov 3, 2022

inquiry about "gff3_to_fasta -st user_defined -u mRNA CDS"

Status: Open.

#124 In NAL-i5K/GFF3toolkit;

· yanzhongsino opened on Apr 22, 2022

removing models from a list

Status: Open.

#123 In NAL-i5K/GFF3toolkit;

· dcopetti opened on Mar 3, 2022