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add default for dataset name
1 parent b951d06 commit 9a52002

1 file changed

Lines changed: 5 additions & 4 deletions

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src/datasync/pit_registering_salmon.py

Lines changed: 5 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -20,19 +20,20 @@
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log,
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)
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23-
BIOMARK_BASE_URL = env("BIOMARK_BASE_URL", default="https://data3.biomark.com/api/v1/")
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BIOMARK_API_EMAIL = env("BIOMARK_API_EMAIL", default="")
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BIOMARK_API_PWD = env("BIOMARK_API_PWD", default="")
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BIOMARK_AWS_ENDPOINT = env("BIOMARK_AWS_ENDPOINT", default="")
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BIOMARK_BUCKET = env("BIOMARK_BUCKET", default="")
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BIOMARK_PREFIX = env("BIOMARK_PREFIX", default="tables")
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BIOMARK_REGION = env("BIOMARK_REGION", default="us-east-1")
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BIOMARK_ACCESS_KEY = env("BIOMARK_ACCESS_KEY", default="")
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BIOMARK_SECRET_KEY = env("BIOMARK_SECRET_KEY", default="")
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BIOMARK_PREFIX = env("BIOMARK_PREFIX", default="tables")
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BIOMARK_REGION = env("BIOMARK_REGION", default="us-east-1")
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BIOMARK_BASE_URL = env("BIOMARK_BASE_URL", default="https://data3.biomark.com/api/v1/")
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BIOMARK_DUCKDB_PATH = env(
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"BIOMARK_DUCKDB_PATH", default="biomark_pit_registering_salmon_v1.duckdb"
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)
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BIOMARK_DATASET_NAME = env("BIOMARK_DATASET_NAME", default="")
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BIOMARK_DATASET_NAME = env("BIOMARK_DATASET_NAME", default="main")
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app = typer.Typer()
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