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OHDSI
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Initial attempt at cleansing via sqlrender
- #241
#241
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AnthonyMolinaro
wants to merge 12 commits into
develop
OHDSI/DataQualityDashboard:develop
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cleanse
OHDSI/DataQualityDashboard:cleanse
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Initial attempt at cleansing via sqlrender
#241
AnthonyMolinaro
wants to merge 12 commits into
develop
OHDSI/DataQualityDashboard:develop
from
cleanse
OHDSI/DataQualityDashboard:cleanse
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Commits
Commits on Aug 14, 2021
Initial attempt at cleansing via sqlrender
AnthonyMolinaro
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1519615
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Commits on Aug 31, 2021
cleansing plausble values - only updating, not deleting for plausible hi/lo values
AnthonyMolinaro
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34de580
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Commits on Sep 2, 2021
continued cleansing work
AnthonyMolinaro
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535564c
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Commits on Sep 3, 2021
continued cleansing work
AnthonyMolinaro
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a85f8cc
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Commits on Sep 9, 2021
Initial updates to R code to incorporate optional cleansing
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Commits on Sep 10, 2021
archive tables successfully created, but cleanse not yet working
AnthonyMolinaro
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a403968
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writing cleansing dml to files to serarate them from queries used in execute phase
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Commits on Sep 13, 2021
added logging info for cleansing step, excluding cdmField check from cleanse
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apparently, correlated subqueries using DELETE with EXISTS/NOT EXISTS doesn't work on redshift. Switching to using INs
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d476f04
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Commits on Sep 17, 2021
Truncating archive tables makes no sense, added addiional column to archive tables to track when the archive occurred, minor fixes. Still need to add a try/catch so an error doesn't stop dqd
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3586b2f
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Commits on Sep 20, 2021
Added try/catch, moved post-prep cleanse execution into a function rather than floating free code
AnthonyMolinaro
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4c9a769
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Commits on Sep 22, 2021
Added CAPTURE option, verified functionality, reenabled sqlOnly option of EXECUTE
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062194e
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