New data:
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Addition of 681 metagenomes from 22 publicly available food studies.
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New metagenomes are taxonomically profiled with MetaPhlAn 4 (marker genes database vJan25) and functionally profiled with HUMAnN v3.6 (v30_CHOCOPhlAn_201901).
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Integration of 3,071 prokaryotic MAGs and 205 eukaryotic MAGs generated from the new datasets.
Script update:
- The script for downloading MAGs from Zenodo now warns the user and skips when attempting to download MAGs from datasets for which no MAGs were generated.