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Releases: Xinglab/rMATS-long

rMATS-long v2.1.0

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@EricKutschera EricKutschera released this 26 Jun 18:25
4bf5ff7
  • Add gene_name column to output files
  • Turn off unused dispersion parameter to be compatible with mclogit v0.9.15
  • Add snakemake config options for reusing detected events
  • Update distal coupling scripts
  • Use glm for statistical test when only 2 isoforms are involved
  • Add --novel-junctions to detect_splicing_events.py
  • Update strict ASM requirements
  • Update dependencies

rMATS-long v2.0.1

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@EricKutschera EricKutschera released this 17 Mar 17:01
f1e57a8
  • Create a python package in src/rmats_long/
  • Add basic event analysis
  • Use a GTF from long-read-rna-seq-pipeline in examples
  • Add simple splice graph plot
  • Use Cython in count_reads_for_asms.py
  • Update shiny
  • Add Dockerfile

rMATS-long v1.1.0-alpha

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@EricKutschera EricKutschera released this 14 Nov 16:54
fc1e6df
  • Add new statistical model
  • Add ASM analysis
  • Add snakemake

rMATS-long v1.0.0

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@EricKutschera EricKutschera released this 05 May 18:10

Initial release of rMATS-long