Work in progress, re-analysis of Spring challenge release showing efficiency and accuracy of in silico VDJdb de-noising
See also Messemaker et al. dataset.
The code here is provided for reproducibility purposes:
- R markdown with the code and all software dependencies can be found in
validation_analytics.Rmd - VDJdb dataset is stored in
dump/folder, MATCHMAKERS dataset should be requested from the authors - The R markdown can be compiled and run in R Studio
- The resulting output is provided in
validation_analytics.pdf