rpathviz

Visualizations for the Rpath package.

Installation

To install the package

remotes::install_github("biadias/rpathviz", build_vignettes=FALSE)

If you experience issues installing the package using remotes or don't need the vignettes locally then please use this alternative

pak::pak("biadias/rpathviz")

# Build the GOA 
GOA.obj <- rpath(Ecosense.GOA, eco.name = "Gulf of Alaska")

GOA.plot <- webplotviz(
  GOA.obj,
  h_spacing     = 3,
  text_size     = 2.5,
  node_size_min = 2,
  node_size_max = 30
)

Figure 1. Gulf of Alaska marine food web.

For Rpath description and methods:

Lucey, S. M., Gaichas, S. K., & Aydin, K. Y. (2020). Conducting reproducible ecosystem modeling using the open source mass balance model Rpath. Ecological Modelling 427(2020), 109057. https://doi.org/10.1016/j.ecolmodel.2020.109057.