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Expand file tree Collapse file tree Original file line number Diff line number Diff line change 1- # Release 3.7.0 [ DEV ]
1+ # Release 3.7.0 [ 2026-07-06 ]
22
33### Improvements:
44 * Manage unstranded breakpoints, DNA matrix and translocations with an
55 insertion in ` bin/annotBND.py ` .
66 * Manage unstranded breakpoints in ` bin/strandedBND.py ` and
77 ` bin/annotKnownBND.py ` .
88 * Reduce memory usage for ` bin/depthsMetrics.py ` .
9- * Add script to convert TSV variant database in indexed VCF:
9+ * Add script to convert TSV variants database in indexed VCF:
1010 ` bin/tsvDbToVCF.py ` .
1111 * Store exon/intron postion and HGVSg in JSON with ` bin/VCFToJSON.py ` .
1212 * Use user selected annotation tag in header of empty variants file in
Original file line number Diff line number Diff line change 1- {% set version = "3.6 .0" %}
1+ {% set version = "3.7 .0" %}
22# Dependencies versions
33{% set anacore_version = "=2.12.1" %}
4- {% set pysam_version = "=0.18.0 " %}
5- {% set python_version = ">=3.5 " %}
6- {% set scipy_version = "=1.7 .3" %}
7- {% set sklearn_version = "=1.1 .2" %}
4+ {% set pysam_version = "=0.23.3 " %}
5+ {% set python_version = ">=3.10 " %}
6+ {% set scipy_version = "=1.11 .3" %}
7+ {% set sklearn_version = "=1.3 .2" %}
88
99package :
1010 name : anacore-utils
@@ -33,6 +33,7 @@ requirements:
3333test :
3434 imports :
3535 - scipy
36+ - sklearn
3637 - pysam
3738 - requests
3839 - anacore
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