This is a dockerized version of Davrods tailored for use within Core Unit Bioinformatics at Berlin Institute of Health. It is based on the RIT-Davrods Docker image developed at the Maastricht University.
This image allows for configuring Davrods and iRODS via environment variables. Optional support for read-only anonymous ticket access is also included.
Note that in our use case, secure connections are handled by Traefik in the docker-compose environment. Thus we configure the host internally as HTTP.
This version supports iRODS v4.3.5 and may not be compatible with older or newer server versions.
NOTE: We currently use a v4.3.4 build of Davrods as a v4.3.5 build is not available. To our knowledge this build works with both iRODS versions. Please open a bug report if some issues arise.
Use the provided build.sh script to build the image.
The following commands are available.
If you specify anything else then the startup script will exec this command (e.g., bash).
davrods-start(default) -- Start Davrods
| Variable name | Default Value |
|---|---|
| IRODS_PKG_VERSION | 4.3.5 |
| IRODS_HOST_NAME | localhost |
| IRODS_ZONE_PORT | 1247 |
| IRODS_ZONE_NAME | sodarZone |
| IRODS_SSL_VERIFY_SERVER | none |
| IRODS_SSL_CA_CERT_PATH | /etc/httpd/irods/irods_server.crt |
| IRODS_CLIENT_SERVER_NEGOTIATION | off |
| IRODS_CLIENT_SERVER_POLICY | CS_NEG_REFUSE |
| DAVRODS_VERSION | 1.5.2 |
| DAVRODS_ENABLE_TICKETS | 0 |
| DAVRODS_AUTH_NAME | "Please log in." |
| DAVRODS_AUTH_SCHEME (1) | native |
| DAVRODS_LOG_LEVEL (2) | info |
- Until Davrods switches to using the new iRODS client plugins, this may require a different value than your iCommands auth scheme.
- Set to
debugto see iRODS client error messages in your logs.
To introduce your own theme, use the /etc/httpd/irods/theme/ volume and copy or overwrite the Davrods HTML template files.