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fix(docker/foldseek): keep .git in source stage for version embed #80

fix(docker/foldseek): keep .git in source stage for version embed

fix(docker/foldseek): keep .git in source stage for version embed #80

Triggered via push June 12, 2026 13:59
Status Success
Total duration 12m 23s
Artifacts 2

docker.yml

on: push
detect-changes
4s
detect-changes
bump-versions
bump-versions
Matrix: pr-build-scan
Matrix: rescan-latest
Matrix: build-per-arch
Matrix: merge-and-scan
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4 warnings and 1 notice
detect-changes
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build-per-arch (foldseek, arm64, ubuntu-24.04-arm, linux/arm64)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4, docker/build-push-action@v6, docker/login-action@v3, docker/setup-buildx-action@v3. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
build-per-arch (foldseek, amd64, ubuntu-latest, linux/amd64)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4, docker/build-push-action@v6, docker/login-action@v3, docker/setup-buildx-action@v3. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
merge-and-scan (foldseek)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4, docker/login-action@v3, docker/metadata-action@v5, docker/setup-buildx-action@v3. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Trivy profile
Image ghcr.io/broadinstitute/hvp-lr/foldseek:10.0.1 is 184247523 bytes (<= 2147483648); full scan (vuln+secret), 10m timeout.

Artifacts

Produced during runtime
Name Size Digest
broadinstitute~HVP-LR~EXJGTO.dockerbuild
110 KB
sha256:d8dcf3932770cdd7a8fb749b33f51c3a54753e379f122d9b3a6591e19db23970
broadinstitute~HVP-LR~N4P64Y.dockerbuild
127 KB
sha256:6747db67020f6424fedf712ef2f9dbd825aa0b7b4764080e8ea86af8b2472c65