Stacked bar chart option for generic assay tracks#5539

Merged

inodb merged 31 commits into

cBioPortal:masterfrom

inodb:oncoprint-stacked-bars

Jul 1, 2026

Commits on Jun 30, 2026

Add stacked bar chart option for generic assay tracks (#10747)

inodb
and
claude
committed
Fix WebGL frustum-clipping bars for stacked tracks with >5 shapes

inodb
and
claude
committed
Sort stacked-bar tracks by a picked category, suppress redundant group header

inodb
and
claude
committed
Option to render split generic-assay rows as bar charts instead of gradient

inodb
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claude
committed
Use white-to-dark gradient for non-negative generic-assay tracks

inodb
and
claude
committed
Nested "Sort by" submenu for stacked-bar tracks

inodb
and
claude
committed
"Chart type" submenu + hide absolute mode for fraction-like profiles

inodb
and
claude
committed
Hide default sort items on stacked-bar tracks; relabel default sort

inodb
and
claude
committed
Fix sort-by on mobile + stacked-bar track menu touch support

inodb
and
claude
committed
Anchor the sort-by category at the bottom of each stacked bar

inodb
and
claude
committed
Add "Select all" in track picker and "Total" sort for absolute stacks

inodb
and
claude
committed
Let Move up/Move down cross groups when the track is alone in its group

inodb
and
claude
committed
Restore Sort a-Z / Z-a / Don't sort items on stacked-bar tracks

inodb
and
claude
committed
Fix stacked-bar a-Z/Z-a direction and move Chart type to menu bottom

inodb
and
claude
committed
Revert "Let Move up/Move down cross groups when the track is alone in its group"
inodb
committed
Don't gray out Move up/down for single-track groups

inodb
and
claude
committed
Move up/down on stacked-bar tracks reorders within the generic-assay space

inodb
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claude
committed
Place bulk-toggle before Add Track and make it "Clear all" when selected

inodb
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claude
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Raise Select-all threshold from 25 to 50 entities

inodb
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claude
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Guard against undefined submit payload and rejected-with-undefined

inodb
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claude
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Batch generic-assay data fetch + guard null response + strip shared label prefix

inodb
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claude
committed
Chart-type selector in the Add Tracks dialog for generic-assay profiles

inodb
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claude
committed
Unit tests for sort comparators + prefix-strip; chart type in group header

inodb
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claude
committed
Rework GenericAssaySelection layout: radios below, wide Add Track

inodb
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claude
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Discriminated union for ICategoricalTrackSpec + chart-type loading spinner

inodb
and
claude
committed
Speed up oncoprint rendering: skip core-js parseInt/parseFloat polyfill

inodb
and
claude
committed
Use unary + instead of parseFloat on generic-assay datum values

inodb
and
claude
committed
Trim redundant/verbose comments in oncoprint stacked-bar changes

miccheck12
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claude
committed
Drop stray common-dist/ gitignore entry

miccheck12
and
claude
committed
Address Copilot review issues on stacked-bar tracks

miccheck12
and
claude
committed
Use primary (blue) styling for Add Genes to Heatmap button

miccheck12
and
claude
committed

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Stacked bar chart option for generic assay tracks#5539

Stacked bar chart option for generic assay tracks#5539
inodb merged 31 commits into
cBioPortal:masterfrom
inodb:oncoprint-stacked-bars

Commits on Jun 30, 2026

Add stacked bar chart option for generic assay tracks (#10747)

Fix WebGL frustum-clipping bars for stacked tracks with >5 shapes

Sort stacked-bar tracks by a picked category, suppress redundant group header

Option to render split generic-assay rows as bar charts instead of gradient

Use white-to-dark gradient for non-negative generic-assay tracks

Nested "Sort by" submenu for stacked-bar tracks

"Chart type" submenu + hide absolute mode for fraction-like profiles

Hide default sort items on stacked-bar tracks; relabel default sort

Fix sort-by on mobile + stacked-bar track menu touch support

Anchor the sort-by category at the bottom of each stacked bar

Add "Select all" in track picker and "Total" sort for absolute stacks

Let Move up/Move down cross groups when the track is alone in its group

Restore Sort a-Z / Z-a / Don't sort items on stacked-bar tracks

Fix stacked-bar a-Z/Z-a direction and move Chart type to menu bottom

Revert "Let Move up/Move down cross groups when the track is alone in its group"

Don't gray out Move up/down for single-track groups

Move up/down on stacked-bar tracks reorders within the generic-assay space

Place bulk-toggle before Add Track and make it "Clear all" when selected

Raise Select-all threshold from 25 to 50 entities

Guard against undefined submit payload and rejected-with-undefined

Batch generic-assay data fetch + guard null response + strip shared label prefix

Chart-type selector in the Add Tracks dialog for generic-assay profiles

Unit tests for sort comparators + prefix-strip; chart type in group header

Rework GenericAssaySelection layout: radios below, wide Add Track

Discriminated union for ICategoricalTrackSpec + chart-type loading spinner

Speed up oncoprint rendering: skip core-js parseInt/parseFloat polyfill

Use unary + instead of parseFloat on generic-assay datum values

Trim redundant/verbose comments in oncoprint stacked-bar changes

Drop stray common-dist/ gitignore entry

Address Copilot review issues on stacked-bar tracks

Use primary (blue) styling for Add Genes to Heatmap button