Skip to content

(WIP) Add generic assay frequency table to Study View#5596

Draft
dippindots wants to merge 32 commits into
cBioPortal:masterfrom
dippindots:issue-131-generic-assay-frequency-table
Draft

(WIP) Add generic assay frequency table to Study View#5596
dippindots wants to merge 32 commits into
cBioPortal:masterfrom
dippindots:issue-131-generic-assay-frequency-table

Conversation

@dippindots

@dippindots dippindots commented May 28, 2026

Copy link
Copy Markdown
Collaborator
  • add a profile-level Generic Assay frequency table chart for Study View
  • reuse existing Generic Assay count aggregation to build cohort-level rows
  • sync row selection with genericAssayDataFilters and cover helper logic with tests

View with Codesmith Autofix with Codesmith
Need help on this PR? Tag @codesmith with what you need. Autofix is disabled.

@dippindots dippindots self-assigned this May 28, 2026
@dippindots dippindots changed the title Add generic assay frequency table to Study View (WIP) Add generic assay frequency table to Study View May 28, 2026
@netlify

netlify Bot commented May 28, 2026

Copy link
Copy Markdown

Deploy Preview for cbioportalfrontend ready!

Name Link
🔨 Latest commit b640389
🔍 Latest deploy log https://app.netlify.com/projects/cbioportalfrontend/deploys/6a454b0cbaea7c0008a25f6b
😎 Deploy Preview https://deploy-preview-5596.preview.cbioportal.org
📱 Preview on mobile
Toggle QR Code...

QR Code

Use your smartphone camera to open QR code link.

To edit notification comments on pull requests, go to your Netlify project configuration.

@dippindots dippindots force-pushed the issue-131-generic-assay-frequency-table branch 2 times, most recently from 0d1ab87 to 52eb2b3 Compare June 5, 2026 18:25
@dippindots dippindots force-pushed the issue-131-generic-assay-frequency-table branch from cc09a9b to 200a581 Compare June 11, 2026 19:22
dippindots and others added 22 commits July 1, 2026 15:32
- add a profile-level Generic Assay frequency table chart for Study View
- reuse existing Generic Assay count aggregation to build cohort-level rows
- sync row selection with genericAssayDataFilters and cover helper logic with tests

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
- show top filter pills for Generic Assay frequency table selections
- derive fallback filter labels when entity charts are not visible
- rename the table frequency column to Freq

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
dippindots and others added 6 commits July 1, 2026 15:36
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
@dippindots dippindots force-pushed the issue-131-generic-assay-frequency-table branch from 5150b52 to a9c7b6e Compare July 1, 2026 15:39
dippindots and others added 4 commits July 1, 2026 16:03
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant