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1. FreeBindCraft FreeBindCraft Public

   BindCraft modified to make PyRosetta use and installation optional: no license needed

   Python 156 32

2. esmfold2-pipeline esmfold2-pipeline Public

   Miniprotein and antibody design pipeline for ESMFold2

   Python 40 3

3. sc-rs sc-rs Public

   An open-source Rust implementation of Shape Complementarity (SC)

   Rust 20 1

4. ProtenixScore ProtenixScore Public

   Score existing protein structures (PDB or CIF) with the Protenix confidence head, without running diffusion.

   Python 12 4

5. PPIFlow-Pipeline PPIFlow-Pipeline Public

   Forked from Mingchenchen/PPIFlow

   End-to-end pipeline for PPIFlow

   Python 24 3

6. PXDesign PXDesign Public

   Forked from bytedance/PXDesign

   PXdesign fork used at Ariax Bio

   Python 7 1