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Pixel scatter path flexibility#1933

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joshqsumner wants to merge 9 commits into
v5.0from
pixel-scatter-path-flexibility
Open

Pixel scatter path flexibility#1933
joshqsumner wants to merge 9 commits into
v5.0from
pixel-scatter-path-flexibility

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@joshqsumner

@joshqsumner joshqsumner commented May 19, 2026

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Describe your changes
Changes paths_to_imgs to source which can take the (current) list of paths, a single str path to a directory of images, or a numpy.ndarray image, also adds n and ext arguments to control how many images are returned if using the path input.

Type of update
This is a feature enhancement.

Associated issues
Closes #1932

Additional context
None

For the reviewer
See this page for instructions on how to review the pull request.

  • PR functionality reviewed in a Jupyter Notebook
  • All tests pass
  • Test coverage remains 100%
  • Documentation tested
  • New documentation pages added to plantcv/mkdocs.yml
  • Changes to function input/output signatures added to updating.md
  • Code reviewed
  • PR approved

@joshqsumner joshqsumner added this to the PlantCV v5.0 milestone May 19, 2026
@joshqsumner joshqsumner added the enhancement Enhancements to existing features label May 19, 2026
@deepsource-io

deepsource-io Bot commented May 19, 2026

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DeepSource Code Review

We reviewed changes in fd7655d...4ed1494 on this pull request. Below is the summary for the review, and you can see the individual issues we found as inline review comments.

See full review on DeepSource ↗

PR Report Card

Overall Grade   Security  

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Code Review Summary

Analyzer Status Updated (UTC) Details
Python May 28, 2026 2:24p.m. Review ↗
Code coverage May 28, 2026 2:24p.m. Review ↗

Code Coverage Summary

Language Line Coverage (New Code) Line Coverage (Overall)
Aggregate
100%
[✓ above threshold]
99.9%
[▼ down 0.1% from main]
Python
100%
[✓ above threshold]
99.9%
[▼ down 0.1% from main]

➟ Additional coverage metrics may have been reported. See full coverage report ↗


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@joshqsumner joshqsumner changed the base branch from main to v5.0 May 19, 2026 14:30
@joshqsumner joshqsumner mentioned this pull request May 19, 2026
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More flexible format for arguments to pcv.visualize.pixel_scatter_plot

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