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gtree

Repository for work related to the gtree alignment project.

What is a gtree?

The gtree is a trie indexed on base pairs

installation instructions

make

or

make debug

to build gtree and gtree-debug binaries, and:

make clean

to clean the directory of build artifacts

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Gtree-based alignment project

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  • C 60.6%
  • Perl 31.2%
  • Ruby 4.9%
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