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ci(machines): mark container mounts as safe git directories #588

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Merged
njzjz merged 3 commits into from
Mar 29, 2026
Merged

ci(machines): mark container mounts as safe git directories #588

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a71ac2a
Initial plan
Copilot Mar 29, 2026
c801768
fix: mark workspace as safe for git in machines.yml workflow
Copilot Mar 29, 2026
571e25a
ci(machines): mark container mounts as safe git directories
njzjz-bot Mar 29, 2026
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2 changes: 2 additions & 0 deletions .github/workflows/machines.yml
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Expand Up @@ -20,6 +20,8 @@ jobs:
- ssh_rsync
steps:
- uses: actions/checkout@v6
- name: Mark workspace as safe for git (setuptools_scm)
run: git config --global --add safe.directory "$GITHUB_WORKSPACE"
- run: ./ci/${{ matrix.machine }}.sh
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
2 changes: 1 addition & 1 deletion ci/pbs.sh
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Expand Up @@ -10,6 +10,6 @@ docker exec pbs_master /bin/bash -c "chmod -R 777 /shared_space"
docker exec pbs_master /bin/bash -c "chown -R pbsuser:pbsuser /home/pbsuser"

docker exec pbs_master /bin/bash -c "yum install -y procps"
docker exec pbs_master /bin/bash -c "cd /dpdispatcher && pip install uv && uv pip install --system .[test] coverage && chown -R pbsuser ."
docker exec pbs_master /bin/bash -c "git config --global --add safe.directory /dpdispatcher && cd /dpdispatcher && pip install uv && uv pip install --system .[test] coverage && chown -R pbsuser ."
docker exec -u pbsuser pbs_master /bin/bash -c "cd /dpdispatcher && coverage run --source=./dpdispatcher -m unittest -v && coverage report"
docker exec -u pbsuser --env-file <(env | grep GITHUB) pbs_master /bin/bash -c "cd /dpdispatcher && curl -Os https://uploader.codecov.io/latest/linux/codecov && chmod +x codecov && ./codecov"
4 changes: 2 additions & 2 deletions ci/slurm.sh
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Expand Up @@ -7,5 +7,5 @@ docker compose pull
cd -

docker exec slurmctld /bin/bash -c "yum install -y procps"
docker exec slurmctld /bin/bash -c "cd dpdispatcher && pip install uv && uv pip install --system .[test] coverage && coverage run --source=./dpdispatcher -m unittest -v && coverage report"
docker exec --env-file <(env | grep -e GITHUB -e CODECOV) slurmctld /bin/bash -c "cd dpdispatcher && curl -Os https://uploader.codecov.io/latest/linux/codecov && chmod +x codecov && ./codecov"
docker exec slurmctld /bin/bash -c "git config --global --add safe.directory /dpdispatcher && cd /dpdispatcher && pip install uv && uv pip install --system .[test] coverage && coverage run --source=./dpdispatcher -m unittest -v && coverage report"
docker exec --env-file <(env | grep -e GITHUB -e CODECOV) slurmctld /bin/bash -c "cd /dpdispatcher && curl -Os https://uploader.codecov.io/latest/linux/codecov && chmod +x codecov && ./codecov"
2 changes: 1 addition & 1 deletion ci/ssh.sh
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Expand Up @@ -6,5 +6,5 @@ docker compose pull
./start-ssh.sh
cd -

docker exec test /bin/bash -c "cd /dpdispatcher && pip install uv && uv pip install --system .[test] coverage && coverage run --source=./dpdispatcher -m unittest -v && coverage report"
docker exec test /bin/bash -c "git config --global --add safe.directory /dpdispatcher && cd /dpdispatcher && pip install uv && uv pip install --system .[test] coverage && coverage run --source=./dpdispatcher -m unittest -v && coverage report"
docker exec --env-file <(env | grep -e GITHUB -e CODECOV) test /bin/bash -c "cd /dpdispatcher && curl -Os https://uploader.codecov.io/latest/linux/codecov && chmod +x codecov && ./codecov"
2 changes: 1 addition & 1 deletion ci/ssh_rsync.sh
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Expand Up @@ -10,5 +10,5 @@ cd -
docker exec server /bin/bash -c "apt-get -y update && apt-get -y install rsync"
docker exec test /bin/bash -c "apt-get -y update && apt-get -y install rsync"

docker exec test /bin/bash -c "cd /dpdispatcher && pip install uv && uv pip install --system .[test] coverage && coverage run --source=./dpdispatcher -m unittest -v && coverage report"
docker exec test /bin/bash -c "git config --global --add safe.directory /dpdispatcher && cd /dpdispatcher && pip install uv && uv pip install --system .[test] coverage && coverage run --source=./dpdispatcher -m unittest -v && coverage report"
docker exec --env-file <(env | grep -e GITHUB -e CODECOV) test /bin/bash -c "cd /dpdispatcher && curl -Os https://uploader.codecov.io/latest/linux/codecov && chmod +x codecov && ./codecov"
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