Machine-Learning

This repository contains the code for the machine learning experiments for days to flowering and days to flag leaf emergence phenotypic traits of Sorghum B .

• The trait datasets can be accessed from here.

• For genomic data:

  • Distance matrix
  • Gene clusters

Contents

Visualization

Visualization of environmental variables from MAC season 4 and Kansas State University. Box plots of models for MAC Season 4 - days to flowering.

Days to Flag leaf emergence

Modeling of days to flag leaf emergence from MAC Season 4 using different regression algorithms.

Days to Flowering

Modeling of days to flowering from MAC Season 4 and KSU using different regression algorithms. Performance of the models using different sets of genomic features