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Peter Kerpedjiev edited this page Feb 23, 2017 · 17 revisions 
port=8000

echo "hi" > /tmp/tiny.txt
curl -u user:password \
   -F "datafile=@/tmp/tiny.txt"      \
   -F "filetype=test"      \
   -F "datatype=nothing"     \
   -F "uid=test"     \
   -F "name=Test"     \
   -F "coordSystem=test"   \
   localhost:8000/api/v1/tilesets/

port=8000

FILE=dixon2012-h1hesc-hindiii-allreps-filtered.1000kb.multires.cool
wget -N -P data/ https://s3.amazonaws.com/pkerp/public/${FILE}
curl -X "DELETE" localhost:${port}/api/v1/tilesets/aa/

curl -u user:password \
    -F "datafile=@data/${FILE}" \
    -F "filetype=cooler" \
    -F "datatype=matrix" \
    -F "uid=aa"  \
    -F "coordSystem=hg19" \
    http://localhost:${port}/api/v1/tilesets/

port=8000

FILE=wgEncodeCaltechRnaSeqHuvecR1x75dTh1014IlnaPlusSignalRep2.hitile
wget -N -P data/ https://s3.amazonaws.com/pkerp/public/${FILE}
curl -X "DELETE" localhost:${port}/api/v1/tilesets/bb/

curl -u user:password \
    -F "datafile=@data/${FILE}" \
    -F "filetype=hitile" \
    -F "datatype=vector" \
    -F "uid=bb"  \
    -F "coordSystem=hg19" \
    http://localhost:${port}/api/v1/tilesets/

port=8000

FILE=gene_annotations.short.db
wget -N -P data/ https://s3.amazonaws.com/pkerp/public/${FILE}
curl -X "DELETE" localhost:${port}/api/v1/tilesets/dd/

curl -F "datafile=@data/${FILE}" \
    -F "filetype=beddb" \
    -F "datatype=gene-annotation" \
    -F "uid=dd"  \
    -F "name=Gene annotations" \
    -F "coordSystem=hg19" \
    http://localhost:${port}/api/v1/tilesets/

port=8000

FILE=arrowhead_domains_short.txt.multires.db
wget -N -P data/ https://s3.amazonaws.com/pkerp/public/${FILE}

curl -X "DELETE" localhost:${port}/api/v1/tilesets/f/

curl -F "datafile=@data/${FILE}" \
    -F "filetype=bed2ddb" \
    -F "datatype=arrowhead-domains" \
    -F "uid=f"  \
    -F "name=Arrowhead domains" \
    -F "coordSystem=hg19" \
    http://localhost:${port}/api/v1/tilesets/

port=8000

FILE=hiccups_loops_short.txt.multires.db
wget -N -P data/ https://s3.amazonaws.com/pkerp/public/${FILE}

curl -X "DELETE" localhost:${port}/api/v1/tilesets/i/

curl -F "datafile=@data/${FILE}" \
    -F "filetype=bed2ddb" \
    -F "datatype=hiccups-loops" \
    -F "uid=i"  \
    -F "name=Arrowhead domains" \
    -F "name=HiCCUPS loops" \
    -F "coordSystem=hg19" \
    http://localhost:${port}/api/v1/tilesets/

port=8000

FILE=Dixon2012-J1-NcoI-R1-filtered.1000kb.multires.cool
wget -N -P data/ https://s3.amazonaws.com/pkerp/public/${FILE}
curl -X "DELETE" localhost:${port}/api/v1/tilesets/ma/

curl -F "datafile=@data/${FILE}" \
    -F "filetype=cooler" \
    -F "datatype=matrix" \
    -F "uid=ma"  \
    -F "coordSystem=mm9" \
    http://localhost:${port}/api/v1/tilesets/

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