THRESHER is a framework that replaces fixed cutoffs with data-driven phylothresholds, the SNP thresholds corrected for phylogenetic topology and inferred directly from each dataset's genomic structure.
Please be advised that this pipeline is still in its early development stage. It is subject to significant changes in terms of options, outputs, and other functionalities. Users should be prepared for potential modifications and updates in future releases.
Qianxuan (Sean) She
Developed under the mentorship of:
Dr. Paul J. Planet
Email: planetp@chop.edu
Dr. Ahmed M. Moustafa
Email: moustafaam@chop.edu
Dr. Joseph P. Zackular
Email: joseph.zackular@pennmedicine.upenn.edu
