docs(scn): status — track complete (SV/CNV/render/contrast)#397
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docs(scn): status — track complete (SV/CNV/render/contrast)#397joshfactorial wants to merge 1 commit into
joshfactorial wants to merge 1 commit into
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Update the SCN status doc to reflect completion: SV + CNV models built for both strains and rendered end-to-end (loop closed), the MM26-vs-PA3/BD3 contrast with its confound caveat, the RDCN→INFO/CN CNV format gap + fix, and the v1.20.1 RNG release. Refreshed tooling table, Delta ops notes (strain-override + verify-the-statistic), and the open items (common-reference comparison, Phase 2, harness #395, CNV biology, long reads). Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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Brings
docs/scn_status.mdup to date now that the planned SCN track is complete:SVTYPE=CNV); notes theRDCN→INFO/CNformat gap + the lift that fixes it.Doc only.
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