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nf-core / ampliseq Public

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Comparison of observed sequences to expected#1021

Merged

d4straub merged 17 commits into

nf-core:devnf-core/ampliseq:devfrom

d4straub:benchmarking_2.19.0devd4straub/ampliseq:benchmarking_2.19.0devCopy head branch name to clipboard

Jun 26, 2026

Conversation Commits17 (17)Checks Files changed

Merged

Comparison of observed sequences to expected#1021
d4straub merged 17 commits into
nf-core:devfrom
d4straub:benchmarking_2.19.0dev

Commits

Commits on Jun 23, 2026

initial benchmarking addition
d4straub
committed
adjust benchmarking output, sample filtering, docu
d4straub
committed
merge dev
d4straub
committed
fix newline
d4straub
committed
update nf.test.snap files
d4straub
committed
update output and usage documentation
d4straub
committed

Commits on Jun 24, 2026

update nf.test.snap files
d4straub
committed
improve input, input reading and report warnings
d4straub
committed
fix trailing whitespace
d4straub
committed
add test and rename everything
d4straub
committed

Commits on Jun 25, 2026

re-organize output structure and adapt tests
d4straub
committed
update snaps again
d4straub
committed

Commits on Jun 26, 2026

re-phrase to observed-versus-expected
d4straub
committed
reduce VSEARCH output columns and use original names
d4straub
committed
write also trace_report_suffix to md5sum_version.txt
d4straub
committed
update CHANGELOG
d4straub
committed
resolve possible conflict with sample names
d4straub
committed

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