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- #177 · scwatts opened
on Apr 5, 2025
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enhancementNew feature or requestNew feature or requestStatus: Open.#302 In nf-core/oncoanalyser;Stub behaviour of
purplemodule does not produce.tbifilesbugSomething isn't workingSomething isn't workingStatus: Open.#301 In nf-core/oncoanalyser;- Status: Open.#300 In nf-core/oncoanalyser;
Stub blocks for several modules that output gzipped files have incorrect syntax
bugSomething isn't workingSomething isn't workingStatus: Open.#299 In nf-core/oncoanalyser;Pipeline stub test doesn't snapshot file content
enhancementNew feature or requestNew feature or requestStatus: Open.#298 In nf-core/oncoanalyser;There are no tests for local modules
enhancementNew feature or requestNew feature or requestStatus: Open.#297 In nf-core/oncoanalyser;- Status: Open.#293 In nf-core/oncoanalyser;
virusbreaken: Exception in thread "main" htsjdk.samtools.SAMException: Missing Quality Line at line 2609 in fastq /dev/fd/63
bugSomething isn't workingSomething isn't workingStatus: Open.#292 In nf-core/oncoanalyser;Test profile fails at purple module
bugSomething isn't workingSomething isn't workingStatus: Open.#291 In nf-core/oncoanalyser;Publish fastp reports and log files
enhancementNew feature or requestNew feature or requestStatus: Open.#290 In nf-core/oncoanalyser;- Status: Open.#289 In nf-core/oncoanalyser;
Workflow fails intermittently due to UnknownHostException from s3://ngi-igenomes/igenomes/
bugSomething isn't workingSomething isn't workingStatus: Open.#288 In nf-core/oncoanalyser;