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odelaneau / GLIMPSE Public

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Updates to bring code and documentation in sync#299

Open

tfenne wants to merge 5 commits into

odelaneau:masterodelaneau/GLIMPSE:masterfrom

tfenne:docs-cli-synctfenne/GLIMPSE:docs-cli-syncCopy head branch name to clipboard

Conversation Commits5 (5)Checks Files changed

Open

Updates to bring code and documentation in sync#299
tfenne wants to merge 5 commits into
odelaneau:masterfrom
tfenne:docs-cli-sync

Commits

Commits on Jun 20, 2026

Add documented short flags -T (--threads) and -I (ligate --input)
tfenne
committed
Fix concordance --help text referencing non-existent flags
tfenne
committed
Sync command-line docs with current code on master
tfenne
committed
Fix remaining stale --gt-validation references in concordance
tfenne
committed
Close phase.md table rows in Model/Selection tables (markdownlint MD055)
tfenne
committed

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