An index of community developed tools.
Add here a link to your own plugin that you would like to share with the openBIS users' community.
A web app for rating and evaluating suppliers in the material science environment of Empa, authenticating against openBIS via personal access tokens (PATs). Made up of three repositories:
- Infrastructure (Local deployment of Supplier Rating webapp for openBIS): https://github.com/empa-scientific-it/supplierRatingInfrastructure
- Frontend (Angular/TypeScript): https://github.com/empa-scientific-it/supplierRatingFrontend
- Backend (Java/Spring Boot): https://github.com/empa-scientific-it/supplierRatingBackend
A tool to import/export openBIS instances in JSON https://github.com/empa-scientific-it/instanceio
A CLI tool to extract openBIS usage statistics using the V3 API https://github.com/empa-scientific-it/openbis-usage
An example Jython dropbox including a full CI/CD pipeline for local testing https://github.com/empa-scientific-it/dropbox-402
This dropbox is based on the generic ELN-LIMS dropbox and has been adapted to extract metadata from TIFF images produced by a TESCAN Clara electron microscope https://git.rwth-aachen.de/Kerzel/openbistools/-/tree/main/dropboxes/imm_clara/
A webapp to guide users through data entry workflows in openBIS https://github.com/empa-scientific-it/openbis-chef
A client-side python code to upload (and edit) data and metadata. Main aim is to speed up input time. Both GUI and automation are possible. https://gitlab.empa.ch/openbis-tools/openbis_uploader_207