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Pathways #944

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37ed8dd
[Platform]: Update dependencies and enhance Associations Toolkit with…
carcruz Dec 12, 2025
1bf9318
fix: Update biome.json coverage exclusions and upgrade dependencies i…
carcruz Dec 12, 2025
3bef559
Merge branch 'main' of github.com:opentargets/ot-ui-apps into cc-aotf…
carcruz Dec 12, 2025
c92929f
Merge branch 'main' of github.com:opentargets/ot-ui-apps into cc-aotf…
carcruz Dec 16, 2025
7b2c697
[Platform]: Implement Gene Enrichment Analysis features
carcruz Dec 16, 2025
392c419
[Platform]: Enhance Gene Enrichment Analysis components
carcruz Jan 20, 2026
ce7c84b
Merge branch 'main' of github.com:opentargets/ot-ui-apps into cc-aotf…
carcruz Jan 31, 2026
996d634
Implement Gene Enrichment Analysis features: add actions and reducer …
carcruz Feb 4, 2026
2c368c4
Enhance Gene Enrichment Analysis UI: Introduce results table and tree…
carcruz Feb 5, 2026
8105ae1
Enhance AnalysisContainer and introduce RunHistorySidebar: Add functi…
carcruz Feb 5, 2026
b817fce
ref: update buttons text and help text
polrus Feb 5, 2026
50d9c4b
Refactor Gene Enrichment Analysis components: Enhance UI layout and f…
carcruz Feb 6, 2026
c436775
Integrate Plotly sunburst visualization in Gene Enrichment Analysis: …
carcruz Feb 9, 2026
48eb231
Remove sunburst visualization from AnalysisResults component: Comment…
carcruz Feb 9, 2026
4eb789f
Merge branch 'cc-aotf-pathways' of github.com:opentargets/ot-ui-apps …
carcruz Feb 9, 2026
ce68e47
Update GeneEnrichmentAnalysis component text and reorganize SunburstF…
carcruz Feb 9, 2026
425f508
Enhance Gene Enrichment Analysis components: Implement scroll lock fu…
carcruz Feb 10, 2026
07e6778
Update ResultsTable component to open links in a new tab for improved…
carcruz Feb 10, 2026
c2d90e1
Update OtPopper component to increase zIndex for improved layering in…
carcruz Feb 10, 2026
ee9b711
Enhance Gene Enrichment Analysis components: Add activeRunId prop to …
carcruz Feb 10, 2026
fd295d7
Update API URLs in Gene Enrichment Analysis components to use product…
carcruz Feb 10, 2026
d5cf284
Add configuration for API base URL in Gene Enrichment Analysis compon…
carcruz Feb 10, 2026
1dfdffa
Merge branch 'main' of github.com:opentargets/ot-ui-apps into pathways
carcruz Mar 23, 2026
1851d59
"Overlap Genes" to "Overlapping Genes" in ResultsTable component
polrus Mar 23, 2026
a51c93c
Add library display names for Gene Enrichment Analysis components
polrus Mar 23, 2026
fd871f1
Add tooltips to columns in ResultsTable
polrus Mar 23, 2026
1f2abf6
Update ResultsTreeView component to replace faFlask icon with faFile …
polrus Mar 23, 2026
5e5e23d
ResultsTreeView: change label from "root pathways" to "top-level path…
polrus Mar 23, 2026
9bd2824
ResultsTreeView: update icon colors for significant and non-significa…
polrus Mar 23, 2026
83fd71e
ResultsTable: append current date to data downloader file
polrus Mar 23, 2026
1556abe
ResultsTreeView: adjust icon colors for parent and terminal pathways
polrus Mar 23, 2026
52d82e5
Add tooltips for NES, P-value, FDR, and gene count in ResultsTreeView
polrus Mar 23, 2026
1a5b11b
GeneEnrichmentAnalysisModal: link to GSEA docs in html
polrus Mar 24, 2026
fde188b
InputOverlap type and integrate it into analysis results
polrus Mar 24, 2026
0c9e4df
Merge branch 'main' of github.com:opentargets/ot-ui-apps into pathways
carcruz Mar 26, 2026
c2e13c8
Merge branch 'main' of github.com:opentargets/ot-ui-apps into pathways
carcruz Mar 30, 2026
3bc8d39
[Platform]: revert accidental biome.json platform/src inclusion
carcruz Mar 30, 2026
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2 changes: 2 additions & 0 deletions apps/platform/package.json
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Original file line number Diff line number Diff line change
Expand Up @@ -30,13 +30,15 @@
"graphql": "^15.0.0",
"local-storage": "^2.0.0",
"lodash": "^4.17.21",
"plotly.js-dist": "^3.3.1",
"polished": "^2.3.0",
"query-string": "^6.10.1",
"react": "^18.2.0",
"react-dom": "^18.2.0",
"react-dropzone": "^14.2.3",
"react-gtm-module": "^2.0.11",
"react-helmet": "^6.0.0",
"react-plotly.js": "^2.6.0",
"react-router-dom": "6.28.0",
"react-tsparticles": "^2.0.6",
"sections": "*",
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