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    57 repositories

    • massivora

      Public
      A tool for studying large-scale protein-protein interaction with sequence co-evolution
      Python
      •
      MIT License
      •0•0•3•0•Updated Jul 12, 2026Jul 12, 2026

    • genomDE2FHIR

      Public
      Mapping genomDE Datenkranz (BfArM MV Genomseq, KDK+GRZ) to MII Kerndatensatz FHIR R4
      Python
      •0•0•0•0•Updated Jul 3, 2026Jul 3, 2026

    • genomde-dk-validator

      Public
      Validate genomDE Datenkranz JSON against the BfArM MVGenomseq JSON Schemas (KDK + GRZ), with unknown-field detection.
      Python
      •
      MIT License
      •0•1•0•0•Updated Jul 2, 2026Jul 2, 2026

    • mzpeak-example-data

      Public
      Describe-don't-store recipe for the mzPeak example-data corpus: structure, descriptions, and build_data.sh to rebuild every .mzpeak from public repositories.
      Python
      •
      Other
      •0•0•0•0•Updated Jul 1, 2026Jul 1, 2026

    • mii_broad_consent_mapper

      Public
      maps questions from the MII Broad Consent into the MII core dataset Consent
      Java
      •
      Apache License 2.0
      •2•1•2•1•Updated Jun 18, 2026Jun 18, 2026

    • epytope

      Public
      Python-based framework for computational immunomics
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •9•15•3•0•Updated Jun 11, 2026Jun 11, 2026

    • homepage

      Public
      This repository contains the homepage of the KohlbacherLab.
      researchhomepageabi
      researchhomepageabitbi
      TeX
      •
      MIT License
      •17•2•6•5•Updated May 20, 2026May 20, 2026

    • CPMAssets

      Public
      Images and Data for the Computational Metabolomics and Proteomics Course
      0•0•0•0•Updated May 11, 2026May 11, 2026

    • Generators

      Public
      SCALA and JAVA utils for custom data object generators
      Java
      •
      MIT License
      •1•0•0•0•Updated Nov 19, 2025Nov 19, 2025

    • scala-validators

      Public
      Validator utility for Scala
      Scala
      •
      MIT License
      •0•0•0•1•Updated Nov 4, 2025Nov 4, 2025

    • consent-deidentifier

      Public
      Java
      •0•0•0•0•Updated Jul 27, 2025Jul 27, 2025

    • nse-mv-genomseq

      Public
      Klinische Dokumentation für das Netzwerk Seltene Erkrankungen (MV GenomSeq)
      MIT License
      •0•2•2•0•Updated Jul 21, 2025Jul 21, 2025

    • case_management_mvh

      Public
      Fallmanagement Modellvorhaben Genomsequenzierung (MV GenomSeq) nach § 64e SGB V
      MIT License
      •0•2•0•0•Updated Jul 17, 2025Jul 17, 2025

    • CLAUDIO

      Public
      Structural analysis, mapping, validation, visualization, and modeling of protein cross-links on protein and protein-protein interaction.
      Python
      •
      MIT License
      •1•2•3•1•Updated Jul 14, 2025Jul 14, 2025

    • assignment-tool

      Public
      Assignment tool for grading task sheets
      Python
      •
      MIT License
      •2•0•2•1•Updated Jun 14, 2024Jun 14, 2024

    • bwHC-REST-API-Gateway

      Public
      API Gateway component to expose a REST API for all combined bwHC services
      Scala
      •
      MIT License
      •2•0•1•0•Updated Feb 8, 2024Feb 8, 2024

    • bwHC-Data-Validation-Service

      Public
      bwHC Entry Point Service for data upload, to perform validity checks
      Scala
      •
      MIT License
      •1•1•0•0•Updated Feb 8, 2024Feb 8, 2024

    • bwHC-Query-Service

      Public
      bwHC-Service for queries on MTB data
      Scala
      •
      MIT License
      •0•0•0•0•Updated Feb 8, 2024Feb 8, 2024

    • bwHC-View-Objects

      Public
      Display DTOs (Views) for bwHC MTB model
      Scala
      •
      MIT License
      •0•0•0•0•Updated Feb 8, 2024Feb 8, 2024

    • EVcouplings

      Public
      Evolutionary couplings
      Jupyter Notebook
      •
      Other
      •82•0•0•1•Updated Feb 7, 2024Feb 7, 2024

    • bwhc-frontend

      Public
      Portal UI Prototype (Frontend Application) of bwHealthCloud
      uiprototypefrontend
      uiprototypefrontenduxportalbwhcbwhealthcloud
      MIT License
      •2•1•1•1•Updated Dec 13, 2023Dec 13, 2023

    • bwhc-authentication-api

      Public
      Simple components for authentication in bwhc
      Scala
      •
      MIT License
      •0•0•0•0•Updated Dec 12, 2023Dec 12, 2023

    • bwHC-User-Service

      Public
      User management service for bwHC
      Scala
      •
      MIT License
      •0•0•0•0•Updated Dec 12, 2023Dec 12, 2023

    • bwHC-FHIR-Mappings

      Public
      Mappings between bwHC internal DTO model and FHIR
      Scala
      •
      MIT License
      •0•0•0•0•Updated Dec 12, 2023Dec 12, 2023

    • bwHC-MTB-DTO-Extensions

      Public
      Extension methods for MTB DTOs
      Scala
      •
      MIT License
      •0•0•0•0•Updated Dec 12, 2023Dec 12, 2023

    • bwHC-Data-Transfer-Objects

      Public
      Extracted DTOs from https://github.com/KohlbacherLab/bwHC-Data-Validation-Service
      Scala
      •
      MIT License
      •1•0•0•0•Updated Dec 12, 2023Dec 12, 2023

    • bwHC-Medication-Catalog

      Public
      Scala component for bwHC Medication catalog
      Scala
      •
      MIT License
      •0•0•0•0•Updated Dec 6, 2023Dec 6, 2023

    • bwHC-ICD-Catalogs

      Public
      Scala component for ICD Catalogs (ICD-10-GM and ICD-O-3)
      Scala
      •
      MIT License
      •0•0•0•0•Updated Nov 28, 2023Nov 28, 2023

    • bwHC-CSV-Mappings

      Public
      CSV Mappings for MTB Data Objects
      Scala
      •
      MIT License
      •0•0•0•0•Updated Jul 28, 2023Jul 28, 2023

    • bwhc-backend

      Public
      Overview of repositories for bwHC backend
      Dockerfile
      •
      MIT License
      •2•1•0•0•Updated Jul 17, 2023Jul 17, 2023
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