All

38 repositories

biopkgs
Public
Custom Nix packages not yet available on NixOS/nixpkgs
Nix
•1•1•0•6•Updated Dec 8, 2022Dec 8, 2022
bionode-gff
Public
GFF parser
nodejs parser bioinformatics
nodejs parser bioinformatics tools bionode
JavaScript
•2•3•2•5•Updated Nov 10, 2022Nov 10, 2022
fasta-parser
Public
Buffer Stream parser from FASTA to JSON.
nodejs parser library
nodejs parser library bioinformatics buffers bionode
JavaScript
•
MIT License
•3•5•1•2•Updated Sep 2, 2020Sep 2, 2020
cocalc-docker
Public
Docker setup for running CoCalc as downloadable software on your own computer
Dockerfile
•105•0•0•0•Updated Aug 5, 2020Aug 5, 2020
bionode
Public
Modular and universal bioinformatics
nodejs bioinformatics tools
nodejs bioinformatics tools metapackage bionode os4openscience
JavaScript
•
MIT License
•37•313•15•0•Updated Nov 19, 2019Nov 19, 2019
bionode-fasta
Public
Streamable FASTA parser.
nodejs parser bioinformatics
nodejs parser bioinformatics tools bionode
JavaScript
•
MIT License
•8•14•1•0•Updated Nov 19, 2019Nov 19, 2019
bionode-ncbi
Public
Node.js module for working with the NCBI API (aka e-utils).
nodejs bioinformatics tool
nodejs bioinformatics tool api-client bionode
JavaScript
•
MIT License
•19•68•5•0•Updated Nov 19, 2019Nov 19, 2019
bioflow
Public
0•0•0•0•Updated Jan 12, 2019Jan 12, 2019
bionode-sra
Public
Node.js wrapper for SRA Toolkit
nodejs wrapper bioinformatics
nodejs wrapper bioinformatics tool bionode
JavaScript
•
MIT License
•2•6•1•0•Updated Jan 9, 2019Jan 9, 2019
biohacker
Public
A nodeschool workshop that gives some usage examples of bionode for bioinformatics
nodejs docker bioinformatics
nodejs docker bioinformatics tutorial bionode try-bionode-io
JavaScript
•1•6•2•0•Updated Oct 28, 2018Oct 28, 2018
gsoc18
Public
JavaScript
•0•0•0•0•Updated Aug 12, 2018Aug 12, 2018
bionode-watermill
Public
💧Bionode-Watermill: A (Not Yet Streaming) Workflow Engine
nodejs bioinformatics pipeline
nodejs bioinformatics pipeline tool bionode
JavaScript
•
MIT License
•6•37•30•0•Updated Jun 27, 2018Jun 27, 2018
bionode-watermill-tutorial
Public
This is a tutorial for bionode-watermill
JavaScript
•2•1•1•0•Updated Apr 26, 2018Apr 26, 2018
GSoC17
Public
GSoC Project: Streaming Workflow Engine
JavaScript
•4•0•2•0•Updated Mar 31, 2018Mar 31, 2018
bionode-vcf
Public
vcf parser using javascript
nodejs parser bioinformatics
nodejs parser bioinformatics tool bionode
JavaScript
•
MIT License
•6•5•5•0•Updated Mar 22, 2018Mar 22, 2018
bionode-fastq
Public
Streamable FASTQ parser
nodejs parser bioinformatics
nodejs parser bioinformatics tool bionode
JavaScript
•
MIT License
•3•2•2•0•Updated Oct 4, 2017Oct 4, 2017
bionode-blast
Public
NodeJS API wrapping the NCBI BLAST Common URL API. WIP.
nodejs bioinformatics tool
nodejs bioinformatics tool api-client bionode
JavaScript
•2•1•0•0•Updated Oct 4, 2017Oct 4, 2017
bionode-quickgo
Public
Acess EBI QuickGO REST API with promises and streams.
nodejs bioinformatics tool
nodejs bioinformatics tool api-client bionode
JavaScript
•1•1•1•0•Updated Oct 4, 2017Oct 4, 2017
bionode-scripts
Public
Random useful scripts
nodejs bioinformatics scripts
nodejs bioinformatics scripts bionode
JavaScript
•1•0•1•0•Updated Oct 4, 2017Oct 4, 2017
events
Public
Gather together a group to skill-share, co-work, and create community
website workshops
website workshops
JavaScript
•
Other
•524•0•1•0•Updated Oct 4, 2017Oct 4, 2017
bionode.io
Public
Bionode website
website bionode
website bionode
HTML
•3•2•0•0•Updated Sep 14, 2017Sep 14, 2017
github-project-public
Public
Make GitHub project board visible to non members
CSS
•
MIT License
•10•1•1•0•Updated Sep 14, 2017Sep 14, 2017
doc.bionode.io
Public
Beautiful static documentation for your API
website bionode
website bionode
JavaScript
•
Other
•21k•0•0•0•Updated Sep 14, 2017Sep 14, 2017
bionode-sam
Public
Node.js wrapper for samtools.
nodejs wrapper bioinformatics
nodejs wrapper bioinformatics tool bionode
JavaScript
•
MIT License
•3•5•3•0•Updated Aug 28, 2017Aug 28, 2017
bionode-seq
Public
Module for DNA, RNA and protein sequences manipulation
nodejs bioinformatics tool
nodejs bioinformatics tool sequences bionode
JavaScript
•
MIT License
•3•10•3•0•Updated Aug 24, 2017Aug 24, 2017
bionode-obo
Public
Streaming OBO 1.2 Parser
nodejs parser bioinformatics
nodejs parser bioinformatics tool bionode
JavaScript
•3•3•13•0•Updated Aug 24, 2017Aug 24, 2017
timeline
Public
[project] gantt chart for msl
JavaScript
•11•1•0•0•Updated Jun 13, 2017Jun 13, 2017
bionode-bwa
Public
A Node.js wrapper for the Burrow-Wheeler Aligner (BWA).
nodejs wrapper bioinformatics
nodejs wrapper bioinformatics tool bionode
JavaScript
•
MIT License
•2•8•1•0•Updated Jun 1, 2017Jun 1, 2017
bionode-examples
Public
Bionode usage example files
nodejs bioinformatics examples
nodejs bioinformatics examples bionode
JavaScript
•0•5•0•0•Updated Jun 1, 2017Jun 1, 2017
bionode-go
Public
Gene Ontology in Bionode (WIP)
nodejs bioinformatics tool
nodejs bioinformatics tool api-client bionode
JavaScript
•2•7•0•0•Updated Jun 1, 2017Jun 1, 2017

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bionode

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38 repositories

biopkgs

bionode-gff

fasta-parser

cocalc-docker

bionode

bionode-fasta

bionode-ncbi

bioflow

bionode-sra

biohacker

gsoc18

bionode-watermill

bionode-watermill-tutorial

GSoC17

bionode-vcf

bionode-fastq

bionode-blast

bionode-quickgo

bionode-scripts

events

bionode.io

github-project-public

doc.bionode.io

bionode-sam

bionode-seq

bionode-obo

timeline

bionode-bwa

bionode-examples

bionode-go

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Repositories list

38 repositories