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Select group of cells#198

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TeunHuijben wants to merge 43 commits into
mainfrom
Xiang
Draft

Select group of cells#198
TeunHuijben wants to merge 43 commits into
mainfrom
Xiang

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@TeunHuijben

@TeunHuijben TeunHuijben commented Apr 22, 2025

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Compared to Main, this branch:

  • the Export Cell Tracks button only export the selected cells. Not all cells of the tracks, of all related tracks
  • adds a button that allows automatic selection of all red cells (for hex-binary attributes)

ToDo:

  • solve pink-cell issue if button is pressed in different time frame than annot_time
  • add hex-binary to TO script when creating the zarr
  • config back to normal
  • solve warning error when selecting more than 100 cells
  • change name of button
  • attributes[i] === 16711680 is hardcoded in components/CellControls.tsx, which only works if cells are red

Notes:

  • annot_time not in zattrs automatically (do this manually) > now annot_point_ids are saved in attributes/.zattrs that contain the first point of each track per annotation, which makes loading 200x faster. Just means we have to run it.add_annotations after zarr creation
  • keep this PR open for Xiang, don't merge with main, because it affects the export function

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intracktive Ready Ready Preview, Comment Jun 23, 2026 9:37pm

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