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Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk>
Blast update
This function was to ensure that all BUSCO names were valid according to the pre-recorded list. But after all they don't have to. We know some people make their own database like collembola_odb10
It makes things faster !
prototaxites
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Feb 11, 2026
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Looks good to me from a Nextflow perspective. A couple minor thoughts about some of the error/help messages
| * Function to validate and resolve BUSCO database paths | ||
| * Handles the common user error of including '/lineages' at the end of the path | ||
| */ | ||
| def validateBuscoDatabase(db_path) { |
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general comment: this would be a nice function for a sanger-tol plugin
…he second one meta2
nf-test and pre-computed BUSCOs
Strict syntax and linting
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Preparation for the release
PR checklist
nf-core pipelines lint).nextflow run . -profile test,docker --outdir <OUTDIR>).nextflow run . -profile debug,test,docker --outdir <OUTDIR>).docs/usage.mdis updated.docs/output.mdis updated.CHANGELOG.mdis updated.README.mdis updated (including new tool citations and authors/contributors).