Harden retry loops in run_mmseqs2 - #829

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volgin wants to merge 3 commits into

sokrypton:mainfrom

Novel-Therapeutics:harden-msa-server-retries

Commits on May 18, 2026

Fix unbounded retry loops in status and template fetches
andreivolgin
committed
d94d51c
Cap status, download, and template retries at 5 attempts
andreivolgin
committed
7906676
Drop Timeout-only branches so timeouts go through the bounded retry path
andreivolgin
committed
f7b5b15