check if input file is compressed (gziped/bzip2ed) and open accordingly - #130
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mdcao wants to merge 3 commits into
Open
check if input file is compressed (gziped/bzip2ed) and open accordingly#130mdcao wants to merge 3 commits into
mdcao wants to merge 3 commits into
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Any chance that this will ever be merged? Uncompressing 1000's of gzip'ed fasta files just to run them through prokka can be a bit of pain. |
Owner
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Can you just run I will consider using |
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Shell redirection can cause some problems in certain situations and is something that biologists with less computational knowledge know how to do, but yeah it should work for me. Thanks for the suggestion! |
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making prokka seamlessly read gziped/bzip2ed files