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Expand file tree Collapse file tree Original file line number Diff line number Diff line change @@ -51,7 +51,7 @@ Below is a summary of how to run the pipeline. See [here](https://uclahs-cds.at
51511 . The pipeline can be executed locally using the command below:
5252
5353``` bash
54- nextflow run path/to/main.nf -config path/to/input.config -params-file input.yaml`
54+ nextflow run path/to/main.nf -config path/to/input.config -params-file input.yaml
5555```
5656
5757---
@@ -324,7 +324,7 @@ Strelka2's runtime will be significantly improved when using `--callRegions` opt
324324Therefore, we strongly suggest to use the ` --callRegions ` if the non-canonical region is unnecessary.
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326326#### MuSE v2.0
327- MuSE v2.0 was tested with a normal/tumor paired CPCG0196 WGS sample on a F32 slurm-dev node.
327+ MuSE v2.0 was tested with a normal/tumor paired CPCG0196 WGS sample on an exclusive node with 32 cpus and 64 GB memory .
328328Duration: 1d 11h 6m 54s
329329
330330| process_name | max_duration | max_cpu | max_peak_vmem |
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