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chore: update citation and the reference to the published version #16

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4 changes: 2 additions & 2 deletions README.md
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Original file line number Diff line number Diff line change
Expand Up @@ -3,14 +3,14 @@
![Status](https://img.shields.io/badge/status-active-brightgreen?style=flat-square)
![Contributions Welcome](https://img.shields.io/badge/contributions-welcome-blue?style=flat-square)
[![Platform](https://img.shields.io/badge/platform-web-blueviolet?style=flat-square)](https://gpmbook.lamalab.org/)
[![arXiv](https://img.shields.io/badge/arXiv-2507.07456-b31b1b.svg)](https://arxiv.org/abs/2507.07456)
[![DOI](https://img.shields.io/badge/DOI-10.1021%2Facs.chemrev.5c00583-blue?style=flat-square)](https://doi.org/10.1021/acs.chemrev.5c00583)

## 📘 Read the Review

You can read the review directly on
or access it as a collaborative online book at:
Comment on lines 10 to 11

@sourcery-ai sourcery-ai Bot Mar 12, 2026

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suggestion (typo): The sentence is incomplete and could be clarified by specifying where the review can be read.

The phrase "You can read the review directly on" is missing its object, so the sentence is grammatically incomplete. Consider something like: "You can read the review directly on Chemical Reviews, or access it as a collaborative online book at:"

Suggested change
You can read the review directly on
or access it as a collaborative online book at:
You can read the review directly on Chemical Reviews, or access it as a collaborative online book at:


👉 [arXiv](https://arxiv.org/pdf/2507.07456)
👉 [Chemical Reviews](https://pubs.acs.org/doi/full/10.1021/acs.chemrev.5c00583)

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For link stability, consider using the DOI resolver URL (https://doi.org/...) here instead of the publisher-specific pubs.acs.org/doi/full/... URL. The DOI link will remain stable even if the publisher changes URL structure.

Suggested change
👉 [Chemical Reviews](https://pubs.acs.org/doi/full/10.1021/acs.chemrev.5c00583)
👉 [Chemical Reviews](https://doi.org/10.1021/acs.chemrev.5c00583)

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Comment on lines 10 to +13

@coderabbitai coderabbitai Bot Mar 12, 2026

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⚠️ Potential issue | 🟡 Minor

Incomplete sentence on line 11.

Line 11 reads "or access it as a collaborative online book at:" which suggests there should be text before it (e.g., "You can read the review directly on [Chemical Reviews]... or access it..."). The sentence structure appears broken, likely from when the arXiv reference was removed.

Consider rephrasing for clarity:

📝 Suggested fix 
 ## 📘 Read the Review

-You can read the review directly on
-or access it as a collaborative online book at:
+You can read the review directly on Chemical Reviews or access it as a collaborative online book:

 👉 [Chemical Reviews](https://pubs.acs.org/doi/full/10.1021/acs.chemrev.5c00583)
📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
You can read the review directly on
or access it as a collaborative online book at:
👉 [arXiv](https://arxiv.org/pdf/2507.07456)
👉 [Chemical Reviews](https://pubs.acs.org/doi/full/10.1021/acs.chemrev.5c00583)
## 📘 Read the Review
You can read the review directly on Chemical Reviews or access it as a collaborative online book:
👉 [Chemical Reviews](https://pubs.acs.org/doi/full/10.1021/acs.chemrev.5c00583)
🤖 Prompt for AI Agents 
Verify each finding against the current code and only fix it if needed.

In `@README.md` around lines 10 - 13, The README contains an incomplete sentence
fragment starting with "or access it as a collaborative online book at:"
(followed by "👉 [Chemical
Reviews](https://pubs.acs.org/doi/full/10.1021/acs.chemrev.5c00583)"); fix by
rephrasing the two fragments into a single complete sentence or two clear
sentences—for example, prepend the missing subject to form "You can read the
review directly on [source] or access it as a collaborative online book at: 👉
[Chemical Reviews](...)" or remove "or" and make "Access it as a collaborative
online book at: 👉 [Chemical Reviews](...)" so the README reads cleanly and
grammatically.


👉 [Online Book](https://gpmbook.lamalab.org/)

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18 changes: 13 additions & 5 deletions quarto_book/index.qmd
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Expand Up @@ -79,11 +79,19 @@ K.M.J. has been a paid contractor for OpenAI as part of the Red-Teaming Network.
If you find this work useful, please cite it using:

```bibtex
@article{alampara2025general,
title = {General purpose models for the chemical sciences},
author = {Nawaf Alampara and Anagha Aneesh and Martiño Ríos-García and Adrian Mirza and Mara Schilling-Wilhelmi and Ali Asghar Aghajani and Meiling Sun and Gordan Prastalo and Kevin Maik Jablonka},
year = {2025},
journal = {arXiv preprint arXiv: 2507.07456}
@article{Alampara2026,
title = {General-Purpose Models for the Chemical Sciences: LLMs and Beyond},
volume = {126},
ISSN = {1520-6890},
url = {http://dx.doi.org/10.1021/acs.chemrev.5c00583},
DOI = {10.1021/acs.chemrev.5c00583},
Comment on lines +86 to +87

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The BibTeX entry uses url = {http://dx.doi.org/...} and an uppercase DOI field. For better compatibility and avoiding mixed-content HTTP, prefer https://doi.org/... and the conventional lowercase doi field name (many tooling chains key off doi).

Suggested change
url = {http://dx.doi.org/10.1021/acs.chemrev.5c00583},
DOI = {10.1021/acs.chemrev.5c00583},
url = {https://doi.org/10.1021/acs.chemrev.5c00583},
doi = {10.1021/acs.chemrev.5c00583},

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number = {4},
journal = {Chemical Reviews},
publisher = {American Chemical Society (ACS)},
author = {Alampara, Nawaf and Aneesh, Anagha and Ríos-García, Martiño and Mirza, Adrian and Schilling-Wilhelmi, Mara and Aghajani, Ali Asghar and Sun, Meiling and Prastalo, Gordan and Jablonka, Kevin Maik},
year = {2026},
month = feb,
pages = {2484–2549}

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In BibTeX, page ranges should use a double hyphen (--) rather than a Unicode en-dash. Using 2484–2549 can break some BibTeX parsers/formatters or render incorrectly; consider switching to 2484--2549.

Suggested change
pages = {2484–2549}
pages = {2484--2549}

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}
```

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