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    85 repositories

    • tide

      Public
      Java
      •16•1•0•0•Updated Aug 7, 2026Aug 7, 2026

    • PEDSpace

      Public
      An implementation of the DSpace open-source repository package for PEDSnet.
      TypeScript
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•8•2•Updated Aug 6, 2026Aug 6, 2026

    • pedsnet_ndq

      Public
      The PEDSnet specific implementation of the NDQ package
      R
      •0•1•0•0•Updated Aug 5, 2026Aug 5, 2026

    • Data_Models_Public

      Public
      The home for usage standards for the network's data models: PEDSnet/OMOP and PCORnet for PEDSnet.
      5•13•3•0•Updated Jul 22, 2026Jul 22, 2026

    • llm_dx_note_extract

      Public
      Analytic codebase for "Using Large Language Models to Reliably Extract Diagnosis Data from Clinical Notes"
      R
      •0•0•0•0•Updated Jul 10, 2026Jul 10, 2026

    • PEDSpace-Wizard

      Public
      Python
      •1•0•0•0•Updated Jul 8, 2026Jul 8, 2026

    • dqa_processing

      Public
      Component of the PEDSnet network data quality pipeline that reshapes and performs computations on the output from dqa_library
      R
      •
      Mozilla Public License 2.0
      •0•1•0•0•Updated Jul 7, 2026Jul 7, 2026

    • dqa_shiny

      Public
      Code for generating an R shiny dashboard displaying data quality check output
      R
      •
      Mozilla Public License 2.0
      •0•0•0•0•Updated Jul 7, 2026Jul 7, 2026

    • rapid_obesity_severe_infection

      Public
      Main repository for RAPID study looking at the association between BMI category and subsequent severe infectious infections.
      R
      •0•0•0•0•Updated Jul 1, 2026Jul 1, 2026

    • DQResults_MAP

      Public
      Metadata application profile for data quality result artifacts. Developed as part of PEDSnet study, Semantic Data Quality Standards for Multi-Center Clinical Re…
      metadatadata-quality
      metadatadata-quality
      Mozilla Public License 2.0
      •0•0•0•0•Updated Jul 1, 2026Jul 1, 2026

    • ndq

      Public
      Packaged version of the Network Data Quality suite (dqa_library + dqa_processing)
      R
      •
      Mozilla Public License 2.0
      •0•3•0•0•Updated Jul 1, 2026Jul 1, 2026

    • infomodels-duckdb

      Public
      Python
      •
      Mozilla Public License 2.0
      •3•5•1•0•Updated Jun 10, 2026Jun 10, 2026

    • chen_sdoh

      Public
      R
      •0•0•0•0•Updated Jun 9, 2026Jun 9, 2026

    • AtlasTrino

      Public
      ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data
      JavaScript
      •
      Apache License 2.0
      •153•0•0•0•Updated Jun 8, 2026Jun 8, 2026

    • COMPARE-LessID

      Public
      COMPARE Less-ID pipeline
      Python
      •0•0•0•0•Updated May 18, 2026May 18, 2026

    • argos

      Public
      Affordances for Retrieval of General Observational Stuff
      R
      •
      Other
      •1•0•4•2•Updated May 1, 2026May 1, 2026

    • data-models

      Public
      Collection of various biomedical data models in parseable formats.
      9•0•0•0•Updated Apr 20, 2026Apr 20, 2026

    • sickle_cell_gibson

      Public
      R
      •0•0•0•0•Updated Mar 25, 2026Mar 25, 2026

    • gluck_bone_marrow_resources

      Public
      R
      •0•0•0•0•Updated Mar 25, 2026Mar 25, 2026

    • DatabaseConnectorTrino

      Public
      An R package for connecting to databases using JDBC.
      R
      •91•0•0•0•Updated Feb 9, 2026Feb 9, 2026

    • pedsnetdcc

      Public
      CLI tool for PEDSnet data coordinating center ETL tasks
      Python
      •
      Other
      •0•0•20•6•Updated Feb 5, 2026Feb 5, 2026

    • blossom_feasibility

      Public
      BLOSSOM sepsis feasibility request
      R
      •0•0•0•0•Updated Jan 29, 2026Jan 29, 2026

    • lessid_sas

      Public
      SAS
      •0•0•0•0•Updated Dec 9, 2025Dec 9, 2025

    • AchillesTrino

      Public
      Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a OMOP CDM database
      R
      •135•0•0•0•Updated Sep 11, 2025Sep 11, 2025

    • SqlRenderTrino

      Public
      This is an R package and Java library for rendering parameterized SQL, and translating it to different SQL dialects.
      R
      •
      Other
      •85•0•0•0•Updated Sep 11, 2025Sep 11, 2025

    • WebAPITrino

      Public
      OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications
      Java
      •
      Apache License 2.0
      •182•0•0•0•Updated Sep 9, 2025Sep 9, 2025

    • PEDSpace-README-Template

      Public template
      README Template for Code Submissions to PEDSpace
      The Unlicense
      •23k•0•0•0•Updated Aug 1, 2025Aug 1, 2025

    • pedsnetdcc_v2

      Public
      Python
      •0•0•0•0•Updated Jun 10, 2025Jun 10, 2025

    • ArachneExecutionEngineTrino

      Public
      Arachne Execution Engine is a component used to execute remote SQL or R code. It is used by both Arachne Data Node as well as WebAPI
      PLpgSQL
      •10•0•0•0•Updated May 21, 2025May 21, 2025

    • new_site_onboarding_dq

      Public
      Python
      •0•0•0•0•Updated May 20, 2025May 20, 2025
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