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bifrost 0.1.4

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@jakeberv jakeberv released this 20 Apr 02:00
· 82 commits to main since this release
v0.1.4
6509512
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Learn about vigilant mode.

  • Documentation / vignettes:

    • Added a new "Quick Start with bifrost" vignette with a minimal end-to-end simulated example.
    • Clarified searchOptimalConfiguration() documentation around acceptable tree inputs, recommended mvgls() methods ("H&L" vs "LL"), and the role of error = TRUE.
    • Reworked the README to foreground installation, documentation, and citation guidance.
    • Added two pkgdown-only background articles on multivariate Brownian motion / shifts and on whole-tree PCA / model-selection issues.

  • Citation / metadata:

    • Updated package authorship metadata to reflect the current author list.
    • Updated citation("bifrost") for the live bioRxiv preprint and the in-press application paper.
    • Added the foundational mvMORPH citations to the package citation metadata.
    • Added a formatted citation section and dynamic bioRxiv badge to the README.

  • Maintenance:

    • Disabled a deprecated vignette-preview step in GitHub Actions CI.
Assets 2
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